RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 EYA4O95677 639 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 PPP3CAQ08209 521 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 RESTQ13127 1097 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 TP53BP2Q13625 1128 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 SDE2Q6IQ49 451 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 FAM180AQ6UWF9 173 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 RHOT2Q8IXI1 618 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 LINC00476Q8WZB0 136 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 HOXB13Q92826 284 aaPredicted RBP5.88□□□□□ -1.47
VRK1-207ENST00000557352 ACE2Q9BYF1 805 aaPredicted RBP5.88□□□□□ -1.47
VRK1-207ENST00000557352 RIOX1Q9H6W3 641 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 SYNPO2LQ9H987 977 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 DMRT3Q9NQL9 472 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 RBM12Q9NTZ6 932 aaKnown RBP5.88□□□□□ -1.47
VRK1-207ENST00000557352 USP35Q9P2H5 1018 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 ATP11BQ9Y2G3 1177 aa5.88□□□□□ -1.47
VRK1-207ENST00000557352 ZAR1LA6NP61 321 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 SPDEFO95238 335 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 CFIP05156 583 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 AVPR1BP47901 424 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 PER3P56645 1201 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 RAP2BP61225 183 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 TMPRSS15P98073 1019 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 SRSF2Q01130 221 aaKnown RBP5.87□□□□□ -1.47
VRK1-207ENST00000557352 ANO4Q32M45 955 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 MUM1L1Q5H9M0 696 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 CT47A1Q5JQC4 288 aaPredicted RBP5.87□□□□□ -1.47
VRK1-207ENST00000557352 RRP12Q5JTH9 1297 aaKnown RBP5.87□□□□□ -1.47
VRK1-207ENST00000557352 GJC2Q5T442 439 aaPredicted RBP5.87□□□□□ -1.47
VRK1-207ENST00000557352 AFMIDQ63HM1 303 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 LHFPL2Q6ZUX7 228 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 MED25Q71SY5 747 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 PQLC1Q8N2U9 271 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 OR56A1Q8NGH5 318 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 ASB10Q8WXI3 467 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 COQ10AQ96MF6 247 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 UHRF1Q96T88 793 aaPredicted RBP5.87□□□□□ -1.47
VRK1-207ENST00000557352 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
VRK1-207ENST00000557352 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
VRK1-207ENST00000557352 ELANEP08246 267 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 HKR1P10072 659 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 EGR2P11161 476 aaPredicted RBP5.86□□□□□ -1.47
VRK1-207ENST00000557352 GUCY1A2P33402 732 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 GPR3P46089 330 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 SEC24CP53992 1094 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 FAPQ12884 760 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 ABHD17BQ5VST6 288 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 PRIMA1Q86XR5 153 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 STON2Q8WXE9 905 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 MRI1Q9BV20 369 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 KLHL11Q9NVR0 708 aa5.86□□□□□ -1.47
VRK1-207ENST00000557352 KIAA0355O15063 1070 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 RAP2AP10114 183 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 IL2RBP14784 551 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 MCAMP43121 646 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 FOXI1Q12951 378 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 MALLQ13021 153 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 NOMO1Q15155 1222 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 ARMC6Q6NXE6 501 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 MAPKAPK5Q8IW41 473 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 DRC7Q8IY82 874 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 CAVIN3Q969G5 261 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 AHCYL2Q96HN2 611 aaKnown RBP5.85□□□□□ -1.47
VRK1-207ENST00000557352 SENP6Q9GZR1 1112 aaPredicted RBP5.85□□□□□ -1.47
VRK1-207ENST00000557352 LDAHQ9H6V9 325 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 LANCL2Q9NS86 450 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 DNAJC28Q9NX36 388 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 MOCS1Q9NZB8 636 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 RNF181Q9P0P0 153 aa5.85□□□□□ -1.47
VRK1-207ENST00000557352 CDKL5O76039 1030 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 PRKD3O94806 890 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 GSPT1P15170 499 aaKnown RBP5.84□□□□□ -1.47
VRK1-207ENST00000557352 TYRP1P17643 537 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 ATP5JP18859 108 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 MTNR1BP49286 362 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 CLK3P49761 638 aaKnown RBP5.84□□□□□ -1.47
VRK1-207ENST00000557352 BLOC1S1P78537 153 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 MXRA7P84157 204 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 B3GNTL1Q67FW5 361 aaPredicted RBP5.84□□□□□ -1.47
VRK1-207ENST00000557352 TMEM132CQ8N3T6 1108 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 FUBP3Q96I24 572 aaKnown RBP eCLIP5.84□□□□□ -1.47
VRK1-207ENST00000557352 ADI1Q9BV57 179 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 CCM2LQ9NUG4 571 aaPredicted RBP5.84□□□□□ -1.47
VRK1-207ENST00000557352 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 ZBTB21Q9ULJ3 1066 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 SIK3Q9Y2K2 1263 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
VRK1-207ENST00000557352 GPR39O43194 453 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 FOSP01100 380 aaPredicted RBP5.83□□□□□ -1.48
VRK1-207ENST00000557352 POMCP01189 267 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 VIL1P09327 827 aaKnown RBP5.83□□□□□ -1.48
VRK1-207ENST00000557352 ITGAMP11215 1152 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 CPEP16870 476 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 FPR1P21462 350 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 FBLP22087 321 aaKnown RBP5.83□□□□□ -1.48
VRK1-207ENST00000557352 ALDH1A3P47895 512 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 SLC6A9P48067 706 aa5.83□□□□□ -1.48
VRK1-207ENST00000557352 SLC5A3P53794 718 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms