RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RAPGEFL1Q9UHV5 662 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 CITO14578 2027 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 TEX28O15482 410 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 DCXO43602 365 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 LILRB3O75022 631 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 TBCAO75347 108 aaKnown RBP18.13■□□□□ 0.49
VSX1-207ENST00000557285 SPATA31D3P0C874 917 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 TXLNAP40222 546 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 GRM5P41594 1212 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 CLCN4P51793 760 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 KIAA0319Q5VV43 1072 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 SPATA31D4Q6ZUB0 917 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 PALB2Q86YC2 1186 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 NTPCRQ9BSD7 190 aaKnown RBP18.13■□□□□ 0.49
VSX1-207ENST00000557285 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 CCSER1Q9C0I3 900 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 ADAM7Q9H2U9 754 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 ZSCAN16Q9H4T2 348 aaPredicted RBP18.13■□□□□ 0.49
VSX1-207ENST00000557285 PTPRHQ9HD43 1115 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 ODF2LQ9ULJ1 636 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 SSX2IPQ9Y2D8 614 aa18.13■□□□□ 0.49
VSX1-207ENST00000557285 SRPRBQ9Y5M8 271 aaKnown RBP18.13■□□□□ 0.49
VSX1-207ENST00000557285 SF3B1O75533 1304 aaKnown RBP eCLIP18.13■□□□□ 0.49
VSX1-207ENST00000557285 LOC730098B7Z3J9 87 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 ADH1AP07327 375 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 MCF2P10911 925 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 ALADP13716 330 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 DSG1Q02413 1049 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 NOLC1Q14978 699 aaKnown RBP eCLIP18.12■□□□□ 0.49
VSX1-207ENST00000557285 STK38Q15208 465 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 NAB2Q15742 525 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 USP41Q3LFD5 358 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 TMEM31Q5JXX7 168 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 FAM171A1Q5VUB5 890 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 PRSS55Q6UWB4 352 aaPredicted RBP18.12■□□□□ 0.49
VSX1-207ENST00000557285 DYMQ7RTS9 669 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 HAUS6Q7Z4H7 955 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 RNF168Q8IYW5 571 aaPredicted RBP18.12■□□□□ 0.49
VSX1-207ENST00000557285 ACAP3Q96P50 834 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 POMKQ9H5K3 350 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 PARVGQ9HBI0 331 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 MAN1C1Q9NR34 630 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 TOPORSQ9NS56 1045 aaPredicted RBP18.12■□□□□ 0.49
VSX1-207ENST00000557285 TFIP11Q9UBB9 837 aaKnown RBP18.12■□□□□ 0.49
VSX1-207ENST00000557285 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 KCNG1Q9UIX4 513 aa18.12■□□□□ 0.49
VSX1-207ENST00000557285 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 ABLIM1O14639 778 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 TOM1L1O75674 476 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 B3GAT3O94766 335 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 EFEMP2O95967 443 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 COL9A1P20849 921 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 PROZP22891 400 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 IGFBP6P24592 240 aaPredicted RBP18.11■□□□□ 0.49
VSX1-207ENST00000557285 CLCNKBP51801 687 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 NCKAP1LP55160 1127 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 ITIH3Q06033 890 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 RTP2Q5QGT7 225 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 RRAGBQ5VZM2 374 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 KRI1Q8N9T8 703 aaKnown RBP18.11■□□□□ 0.49
VSX1-207ENST00000557285 RIPOR3Q96MK2 946 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 PPP1R10Q96QC0 940 aaKnown RBP18.11■□□□□ 0.49
VSX1-207ENST00000557285 LRFN3Q9BTN0 628 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 SFXN1Q9H9B4 322 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 C11orf16Q9NQ32 467 aa18.11■□□□□ 0.49
VSX1-207ENST00000557285 C2orf16Q68DN1 1984 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 H0YCG3 227 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 I3L4J1 428 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 CLDN3O15551 220 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 GLUD1P00367 558 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 NMT1P30419 496 aaKnown RBP18.1■□□□□ 0.49
VSX1-207ENST00000557285 DDIT3P35638 169 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 MTHFRP42898 656 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 LIG4P49917 911 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 SLC39A14Q15043 492 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 C18orf25Q96B23 403 aaPredicted RBP18.1■□□□□ 0.49
VSX1-207ENST00000557285 SNX27Q96L92 541 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 ZMAT2Q96NC0 199 aaKnown RBP18.1■□□□□ 0.49
VSX1-207ENST00000557285 TTPALQ9BTX7 342 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 CHST7Q9NS84 486 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 TBX20Q9UMR3 447 aa18.1■□□□□ 0.49
VSX1-207ENST00000557285 HNRNPDLO14979 420 aaKnown RBP18.09■□□□□ 0.49
VSX1-207ENST00000557285 TRAK2O60296 914 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 STAT6P42226 847 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 SOX4Q06945 474 aaPredicted RBP18.09■□□□□ 0.49
VSX1-207ENST00000557285 SPAG1Q07617 926 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 ATAT1Q5SQI0 421 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 ZPBP2Q6X784 338 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 PDILTQ8N807 584 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 NECTIN4Q96NY8 510 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 HAPLN2Q9GZV7 340 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 RXFP1Q9HBX9 757 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 VWA8A3KMH1 1905 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 TRIOO75962 3097 aa18.09■□□□□ 0.49
VSX1-207ENST00000557285 TULP1O00294 542 aaPredicted RBP18.08■□□□□ 0.48
VSX1-207ENST00000557285 MEFVO15553 781 aaPredicted RBP18.08■□□□□ 0.48
VSX1-207ENST00000557285 BRD1O95696 1058 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 CXCL8P10145 99 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 ZNF131P52739 623 aa18.08■□□□□ 0.48
VSX1-207ENST00000557285 PSMD5Q16401 504 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms