RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CFAP69A5D8W1 941 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 PSMD12O00232 456 aaPredicted RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 AP3M2P53677 418 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 FAM167AQ96KS9 214 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CYP4F11Q9HBI6 524 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 SNX14Q9Y5W7 946 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 MSH3P20585 1137 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CCND2P30279 289 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 VIRMAQ69YN4 1812 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 CARMIL3Q8ND23 1372 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 RAD23AP54725 363 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 DYNLT1P63172 113 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 C6orf10Q5SRN2 563 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 PCNX4Q63HM2 1172 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 ZBTB9Q96C00 473 aa9.28□□□□□ -0.92
SYNE3-205ENST00000557275 MRPL39Q9NYK5 338 aaKnown RBP9.28□□□□□ -0.92
SYNE3-205ENST00000557275 RAB25P57735 213 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 PPARAQ07869 468 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 UGT3A1Q6NUS8 523 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 PHACTR1Q9C0D0 580 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 PLEKHA5Q9HAU0 1116 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 SRP72O76094 671 aaKnown RBP9.27□□□□□ -0.92
SYNE3-205ENST00000557275 CNTN1Q12860 1018 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 SLC39A14Q15043 492 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 ZMYND11Q15326 602 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 JADE3Q92613 823 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.92
SYNE3-205ENST00000557275 FAM47EQ6ZV65 393 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 NIM1KQ8IY84 436 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 CPXCR1Q8N123 301 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 ACAD9Q9H845 621 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 UBE2TQ9NPD8 197 aaPredicted RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 LRRN2O75325 713 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 FKBP9O95302 570 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 IL2RBP14784 551 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 FKBP9P1Q75LS8 142 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 RNFT2Q96EX2 444 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 SUGCTQ9HAC7 445 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 A0A1W2PRG6 482 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 FAM47DPA6NHR8 397 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF18P17022 549 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 CCT3P49368 545 aaKnown RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 STX4Q12846 297 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 NEK5Q6P3R8 708 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 C1orf50Q9BV19 199 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 SLITRK2Q9H156 845 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 FBXO28Q9NVF7 368 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 PSMC3IPQ9P2W1 217 aaPredicted RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 SERTAD1Q9UHV2 236 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 KIAA1024Q9UPX6 916 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 PGM3O95394 542 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 HNRNPH2P55795 449 aaKnown RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 FCHO2Q0JRZ9 810 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 EXT2Q93063 718 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 PCDHB15Q9Y5E8 787 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 LRRC53A6NM62 1247 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 MYO1GB0I1T2 1018 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 FAM47E-STBD1D6RA91 191 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 GLMNQ92990 594 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 STARD13Q9Y3M8 1113 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 E7EWF7 191 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF24P17028 368 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 ALKBH5Q6P6C2 394 aaKnown RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 SFR1Q86XK3 245 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 OSBPL8Q9BZF1 889 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 NINQ8N4C6 2090 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 PSTPIP1O43586 416 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 TUBA3CQ13748 450 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 RCN1Q15293 331 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 SLC39A2Q9NP94 309 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 TLR2O60603 784 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 HIRAP54198 1017 aaPredicted RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 LGALS3BPQ08380 585 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 ABRAXAS1Q6UWZ7 409 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 AATKQ6ZMQ8 1374 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 TKTP29401 623 aaKnown RBP9.27□□□□□ -0.93
SYNE3-205ENST00000557275 JAK3P52333 1124 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 KCNK10P57789 538 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 TCEAL5Q5H9L2 206 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
SYNE3-205ENST00000557275 SNX4O95219 450 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 SAP30BPQ9UHR5 308 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PALD1Q9ULE6 856 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PCDHA1Q9Y5I3 950 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 POU5F1BQ06416 359 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 FAM133AQ8N9E0 248 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 UHMK1Q8TAS1 419 aaKnown RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 TRIM39Q9HCM9 518 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 BTBD7Q9P203 1132 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 TMCC3Q9ULS5 477 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 ASXL3Q9C0F0 2248 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 ENC1O14682 589 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 GGCXP38435 758 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 KRT24Q2M2I5 525 aa9.26□□□□□ -0.93
SYNE3-205ENST00000557275 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
SYNE3-205ENST00000557275 PNMA1Q8ND90 353 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms