RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 PIK3R5Q8WYR1 880 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 CCDC113Q9H0I3 377 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 FOXP1Q9H334 677 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 TBC1D17Q9HA65 648 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 TUFT1Q9NNX1 390 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 SLC2A4RGQ9NR83 387 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 PRMT7Q9NVM4 692 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.515e-6■■■■■ 59.2
HNRNPC-230ENST00000557201 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 RIF1Q5UIP0 2472 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 LRRIQ4A6NIV6 560 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 ADAM12O43184 909 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 KIF4AO95239 1232 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.526e-16■■■■■ 52.2
HNRNPC-230ENST00000557201 FOXK2Q01167 660 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 GET4Q7L5D6 327 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 MAEAQ7L5Y9 396 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 MCPH1Q8NEM0 835 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 TTPALQ9BTX7 342 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 RPP25Q9BUL9 199 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 PIDD1Q9HB75 910 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 SNTG2Q9NY99 539 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 CA14Q9ULX7 337 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 NUMBLQ9Y6R0 609 aa11.83□□□□□ -0.52
HNRNPC-230ENST00000557201 CASTOR2A6NHX0 329 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 ACKR2O00590 384 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 N4BP3O15049 544 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 RECQL4O94761 1208 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 THP07101 528 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 POU2F2P09086 479 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 HNRNPA1P09651 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 CYP11B2P19099 503 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 SYT1P21579 422 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 FSHRP23945 695 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 IGFBP6P24592 240 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 HOXA9P31269 272 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 FAM171A1Q5VUB5 890 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 CD300LGQ6UXG3 332 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 HASPINQ8TF76 798 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 FGF14Q92915 247 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 CCDC43Q96MW1 224 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 NACC1Q96RE7 527 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 ARHGEF3Q9NR81 526 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 CDH7Q9ULB5 785 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 USP20Q9Y2K6 914 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 DOCK6Q96HP0 2047 aa11.82□□□□□ -0.52
HNRNPC-230ENST00000557201 H3BQV1 296 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 TMEM189-UBE2V1I3L0A0 370 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 GLULP15104 373 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 ATP2B1P20020 1258 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 RPA1P27694 616 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 MCM7P33993 719 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 STARD6P59095 220 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 NTHL1P78549 312 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 RAB33AQ14088 237 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 PSMD5Q16401 504 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 ECM1Q16610 540 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 EEF1DP3Q658K8 133 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 PADI6Q6TGC4 694 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 PARM1Q6UWI2 310 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 GRASPQ7Z6J2 395 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 NOSTRINQ8IVI9 506 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 ZBTB8OSQ8IWT0 167 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 ST13P5Q8NFI4 369 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 DDX23Q9BUQ8 820 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 C2orf40Q9H1Z8 148 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 SEMA4AQ9H3S1 761 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 VWA8A3KMH1 1905 aa11.81□□□□□ -0.52
HNRNPC-230ENST00000557201 PRKCBP05771 671 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 C8AP07357 584 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 DCNP07585 359 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 FGFR3P22607 806 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 NAMPTP43490 491 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 FOSBP53539 338 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 ELAVL2Q12926 359 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 PRPF4BQ13523 1007 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 MAPK6Q16659 721 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 NT5DC1Q5TFE4 455 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 DCLRE1AQ6PJP8 1040 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 RSPO2Q6UXX9 243 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 CEP57Q86XR8 500 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 MAML2Q8IZL2 1156 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 PJA1Q8NG27 643 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 FGF13Q92913 245 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 PPP1R10Q96QC0 940 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 MTRRQ9UBK8 725 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 SIT1Q9Y3P8 196 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 GVINP1Q7Z2Y8 2422 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 NOTCH4Q99466 2003 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 DNAH14Q0VDD8 3507 aa11.8□□□□□ -0.52
HNRNPC-230ENST00000557201 STK25O00506 426 aa11.79□□□□□ -0.52
HNRNPC-230ENST00000557201 STX6O43752 255 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms