RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 CACNA1IQ9P0X4 2223 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 PATJQ8NI35 1801 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 ACKR2O00590 384 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 ADAM12O43184 909 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 C8AP07357 584 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 HNRNPA1P09651 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 CYP11B2P19099 503 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 RPA1P27694 616 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 NAMPTP43490 491 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 NTHL1P78549 312 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 GUCY1B3Q02153 619 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 PHLDB3Q6NSJ2 640 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 PADI6Q6TGC4 694 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 ERMNQ8TAM6 284 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 ADPGKQ9BRR6 497 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 ZFP37Q9Y6Q3 630 aaPredicted RBP20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 CITO14578 2027 aa20.19■□□□□ 0.82
VIPAS39-209ENST00000556909 DMXL1Q9Y485 3027 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 ARHGEF35A5YM69 484 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 DCNP07585 359 aaKnown RBP20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 OR52Z1P0C646 297 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 LIG1P18858 919 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 HOXA9P31269 272 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 NEK4P51957 841 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 ELAVL2Q12926 359 aaKnown RBP20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 PPM1LQ5SGD2 360 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 EEF1DP3Q658K8 133 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 DEPTORQ8TB45 409 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 FGF14Q92915 247 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 KIFC3Q9BVG8 833 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 CDH7Q9ULB5 785 aa20.18■□□□□ 0.82
VIPAS39-209ENST00000556909 FRYLO94915 3013 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 CCL16O15467 120 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 PPP2R5AQ15172 486 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 SAFBQ15424 915 aaKnown RBP eCLIP20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 DCAF4L1Q3SXM0 396 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 SPECC1Q5M775 1068 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 PDXDC1Q6P996 788 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 DCLRE1AQ6PJP8 1040 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 PARM1Q6UWI2 310 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 RPP25Q9BUL9 199 aaKnown RBP20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 DLGAP2Q9P1A6 1054 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 GDAQ9Y2T3 454 aa20.17■□□□□ 0.82
VIPAS39-209ENST00000556909 CACNA1AO00555 2505 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 PDCD11Q14690 1871 aaKnown RBP20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 TMEM189-UBE2V1I3L0A0 370 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 ORC2Q13416 577 aaPredicted RBP20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 ZNF174Q15697 407 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 GLRA4Q5JXX5 417 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 PJA1Q8NG27 643 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 SLC7A14Q8TBB6 771 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 FGF13Q92913 245 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 FOXQ1Q9C009 403 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 SIT1Q9Y3P8 196 aa20.16■□□□□ 0.82
VIPAS39-209ENST00000556909 OTOGLQ3ZCN5 2332 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 XYLBO75191 536 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 POU2F2P09086 479 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 FGFR3P22607 806 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 IGFBP6P24592 240 aaPredicted RBP20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 RBM25P49756 843 aaKnown RBP20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 FOXK2Q01167 660 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 RAB33AQ14088 237 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 HAUS3Q68CZ6 603 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 ITFG1Q8TB96 612 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 PPP1R10Q96QC0 940 aaKnown RBP20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 MTRRQ9UBK8 725 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 POLIQ9UNA4 740 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 R4GN57 208 aa20.15■□□□□ 0.82
VIPAS39-209ENST00000556909 B3GAT3O94766 335 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 MUTP22033 750 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 OR1D2P34982 312 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 EFNA5P52803 228 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 GPC5P78333 572 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 ECM1Q16610 540 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 TTC38Q5R3I4 469 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 AXDND1Q5T1B0 1012 aaPredicted RBP20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 NT5DC1Q5TFE4 455 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 ATF7IP2Q5U623 682 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 MTSS1LQ765P7 747 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 C8orf76Q96K31 380 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 IFT74Q96LB3 600 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 BHMT2Q9H2M3 363 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 FOXP1Q9H334 677 aaPredicted RBP20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 SEMA4AQ9H3S1 761 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 POLD4Q9HCU8 107 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 MYH11P35749 1972 aa20.14■□□□□ 0.81
VIPAS39-209ENST00000556909 LMNAP02545 664 aaKnown RBP20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 GLULP15104 373 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 CLCNKBP51801 687 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 STARD6P59095 220 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 CD300LGQ6UXG3 332 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 RSPO2Q6UXX9 243 aaPredicted RBP20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 KCNG4Q8TDN1 519 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 KIFAP3Q92845 792 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 DDX27Q96GQ7 796 aaKnown RBP20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 GOLGA2P5Q9HBQ8 144 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 HCFC1R1Q9NWW0 138 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 CDY1Q9Y6F8 540 aa20.13■□□□□ 0.81
VIPAS39-209ENST00000556909 DNAH14Q0VDD8 3507 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms