RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 E9PMD0 336 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 C2CD2LO14523 706 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 SLC26A4O43511 780 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 GLP2RO95838 553 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 SOD2P04179 222 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 THP07101 528 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 ADH1AP07327 375 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 AFF1P51825 1210 aaKnown RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 YARSP54577 528 aaKnown RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 PEX3P56589 373 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 GRIK3Q13003 919 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 STRN3Q13033 797 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 ECM1Q16610 540 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 DNAJC14Q6Y2X3 702 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 RETREG3Q86VR2 466 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 CDR2LQ86X02 465 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 RPGRIP1Q96KN7 1286 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 CD320Q9NPF0 282 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 TOPORSQ9NS56 1045 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 LARSQ9P2J5 1176 aaKnown RBP8.06□□□□□ -1.12
SCFD1-222ENST00000556768 HCN4Q9Y3Q4 1203 aa8.06□□□□□ -1.12
SCFD1-222ENST00000556768 SIP14410 1827 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 PTPRSQ13332 1948 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 EVPLQ92817 2033 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 PP2D1A8MPX8 630 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 H0YCG3 227 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 INPPL1O15357 1258 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 CLASP2O75122 1294 aaKnown RBP8.05□□□□□ -1.12
SCFD1-222ENST00000556768 HSP90AA1P07900 732 aaKnown RBP8.05□□□□□ -1.12
SCFD1-222ENST00000556768 SCP2P22307 547 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 MTHFRP42898 656 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 NPTX2P47972 431 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 CREMQ03060 361 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 USP41Q3LFD5 358 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 ATF7IP2Q5U623 682 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 RINT1Q6NUQ1 792 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 ZBTB33Q86T24 672 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 TMEM173Q86WV6 379 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-222ENST00000556768 COLGALT2Q8IYK4 626 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 AUTS2Q8WXX7 1259 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 MRPL4Q9BYD3 311 aaKnown RBP8.05□□□□□ -1.12
SCFD1-222ENST00000556768 ADAM7Q9H2U9 754 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.05□□□□□ -1.12
SCFD1-222ENST00000556768 SNTG2Q9NY99 539 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 KLK14Q9P0G3 267 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 ZMYM2Q9UBW7 1377 aa8.05□□□□□ -1.12
SCFD1-222ENST00000556768 TRAPPC3O43617 180 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 HIP1RO75146 1068 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 KRT18P05783 430 aaKnown RBP8.04□□□□□ -1.12
SCFD1-222ENST00000556768 CFHP08603 1231 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 GUCY2CP25092 1073 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 ABCD1P33897 745 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 LONP1P36776 959 aaKnown RBP8.04□□□□□ -1.12
SCFD1-222ENST00000556768 TXLNAP40222 546 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 GLUD2P49448 558 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 RBM10P98175 930 aaKnown RBP8.04□□□□□ -1.12
SCFD1-222ENST00000556768 DSC1Q08554 894 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 ELAVL2Q12926 359 aaKnown RBP8.04□□□□□ -1.12
SCFD1-222ENST00000556768 KCNC3Q14003 757 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 PTPN14Q15678 1187 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 RNF135Q8IUD6 432 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 SYT2Q8N9I0 419 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-222ENST00000556768 BSNDQ8WZ55 320 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 INTS4Q96HW7 963 aaKnown RBP8.04□□□□□ -1.12
SCFD1-222ENST00000556768 CCDC94Q9BW85 323 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-222ENST00000556768 APOL5Q9BWW9 433 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 BACH2Q9BYV9 841 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 PDZD7Q9H5P4 517 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 POLD4Q9HCU8 107 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 GDAQ9Y2T3 454 aa8.04□□□□□ -1.12
SCFD1-222ENST00000556768 SF3B1O75533 1304 aaKnown RBP eCLIP8.04□□□□□ -1.123e-6■■■■■ 57.3
SCFD1-222ENST00000556768 PRR33A8MZF0 331 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 CNPP09543 421 aaKnown RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 PLA2G4BP0C869 781 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 MATR3P43243 847 aaKnown RBP eCLIP8.03□□□□□ -1.121e-6■■■□□ 19
SCFD1-222ENST00000556768 RAD51AP2Q09MP3 1159 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 TUSC3Q13454 348 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 CUL4AQ13619 759 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 HSP90AA2PQ14568 343 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 SF3A1Q15459 793 aaKnown RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 IL17AQ16552 155 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 HYIQ5T013 277 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 PDXDC1Q6P996 788 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 SYCE2Q6PIF2 218 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 C1orf186Q6ZWK4 172 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 GPR65Q8IYL9 337 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 VN1R2Q8NFZ6 395 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 SUSD6Q92537 303 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 ACSF2Q96CM8 615 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 PLIN2Q99541 437 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 NTPCRQ9BSD7 190 aaKnown RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 LRFN3Q9BTN0 628 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 KIFC3Q9BVG8 833 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 CCDC113Q9H0I3 377 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 S1PR5Q9H228 398 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 SLC38A7Q9NVC3 462 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms