RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 JPH2Q9BR39 696 aaPredicted RBP19.74■□□□□ 0.75
SDR39U1-220ENST00000556548 C16orf70Q9BSU1 422 aa19.74■□□□□ 0.75
SDR39U1-220ENST00000556548 THAP2Q9H0W7 228 aa19.74■□□□□ 0.75
SDR39U1-220ENST00000556548 SPDYE4A6NLX3 237 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 BTNL10A8MVZ5 291 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 KIAA0391O15091 583 aaKnown RBP19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 VNN1O95497 513 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 IQCF3P0C7M6 154 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 CLDN10P78369 228 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 CKAP4Q07065 602 aaKnown RBP19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 TAF1CQ15572 869 aaPredicted RBP19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 ZACNQ401N2 412 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 EPS8L1Q8TE68 723 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 ARHGEF26Q96DR7 871 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 PCDHB18PQ96TA0 734 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 CHORDC1Q9UHD1 332 aaPredicted RBP19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 CNTNAP2Q9UHC6 1331 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 H3BRB1 525 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 VTNP04004 478 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 MMEP08473 750 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 MEI1Q5TIA1 1274 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 THNSL1Q8IYQ7 743 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 ABHD16BQ9H3Z7 469 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 TUT1Q9H6E5 874 aaKnown RBP19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 C1orf112Q9NSG2 853 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 ARGLU1Q9NWB6 273 aaPredicted RBP19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 AKT3Q9Y243 479 aa19.73■□□□□ 0.75
SDR39U1-220ENST00000556548 CHRNB2P17787 502 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 TCP1P17987 556 aaKnown RBP19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 RNASE9P60153 205 aaKnown RBP19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 TFDP1Q14186 410 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 DUSP28Q4G0W2 176 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 WDR44Q5JSH3 913 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 ZNF484Q5JVG2 852 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 CHADLQ6NUI6 762 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 TPCN2Q8NHX9 752 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 SLC35G2Q8TBE7 412 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 CTNNBL1Q8WYA6 563 aaPredicted RBP19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 VTI1AQ96AJ9 217 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 LENG1Q96BZ8 264 aaPredicted RBP19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 C2orf40Q9H1Z8 148 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 NOCTQ9UK39 431 aaKnown RBP19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 SIP14410 1827 aa19.72■□□□□ 0.75
SDR39U1-220ENST00000556548 SLC15A5A6NIM6 579 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 FTLP02792 175 aaPredicted RBP19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 IRX5P78411 483 aaPredicted RBP19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 CCDC181Q5TID7 509 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 CGRRF1Q99675 332 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 HINFPQ9BQA5 517 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 FLRT1Q9NZU1 646 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 A0A087WZ62 844 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 FAM189A1O60320 539 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 PHACTR2O75167 634 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 PPFIA4O75335 1185 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 CYP11B1P15538 503 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 PRLRP16471 622 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 ATF7IP2Q5U623 682 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 EEF1DP3Q658K8 133 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 CEP120Q8N960 986 aa19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 EMID1Q96A84 441 aaPredicted RBP19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 FDXACB1Q9BRP7 624 aaPredicted RBP19.71■□□□□ 0.75
SDR39U1-220ENST00000556548 DYNC1LI2O43237 492 aaPredicted RBP19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 MMP3P08254 477 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 PTENP60484 403 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 MRPS25P82663 173 aaKnown RBP19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 MBTD1Q05BQ5 628 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 ZNF568Q3ZCX4 644 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 DAAM2Q86T65 1068 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 LRRC57Q8N9N7 239 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 APOBEC3GQ9HC16 384 aaKnown RBP19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 INTUQ9ULD6 942 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 EVPLQ92817 2033 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 ACKR2O00590 384 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 ABLIM1O14639 778 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 TMEM253P0C7T8 217 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 TNFAIP2Q03169 654 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 CCL14Q16627 93 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 IFI16Q16666 785 aaKnown RBP19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 TMCO3Q6UWJ1 677 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 FZD8Q9H461 694 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 IFT122Q9HBG6 1241 aa19.7■□□□□ 0.74
SDR39U1-220ENST00000556548 UMODL1Q5DID0 1318 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 OGTO15294 1046 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 CYP2C19P33261 490 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 PDE6CP51160 858 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 FMO1Q01740 532 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 ENPEPQ07075 957 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 MCL1Q07820 350 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 SAPCD2Q86UD0 394 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 BRSK2Q8IWQ3 736 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 MTMR12Q9C0I1 747 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 ATMINO43313 823 aaPredicted RBP19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 CST3P01034 146 aaPredicted RBP19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 CYP2B6P20813 491 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 GCNT1Q02742 428 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 PPFIA1Q13136 1202 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 RPS6KA1Q15418 735 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 MTHFD1LQ6UB35 978 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 MPZL3Q6UWV2 235 aa19.69■□□□□ 0.74
SDR39U1-220ENST00000556548 TSHZ1Q6ZSZ6 1077 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms