RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 NCAPHQ15003 741 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 FAM117BQ6P1L5 589 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 BRSK2Q8IWQ3 736 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 DHX40Q8IX18 779 aaKnown RBP18.93■□□□□ 0.62
TUBB3-211ENST00000556536 HELQQ8TDG4 1101 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 SNX27Q96L92 541 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 ZFP42Q96MM3 310 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 CEP63Q96MT8 703 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 GAD1Q99259 594 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 RPF1Q9H9Y2 349 aaKnown RBP18.93■□□□□ 0.62
TUBB3-211ENST00000556536 RSAD1Q9HA92 442 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 CBX8Q9HC52 389 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 RBAKQ9NYW8 714 aaPredicted RBP18.93■□□□□ 0.62
TUBB3-211ENST00000556536 FRMD4BQ9Y2L6 1034 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 GIT1Q9Y2X7 761 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 NFE2L3Q9Y4A8 694 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 SLC4A7Q9Y6M7 1214 aa18.93■□□□□ 0.62
TUBB3-211ENST00000556536 TTC26A0AVF1 554 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 ARL5CA6NH57 179 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 LACTBL1A8MY62 500 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 TULP1O00294 542 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-211ENST00000556536 OFD1O75665 1012 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 PSMC2P35998 433 aaKnown RBP18.92■□□□□ 0.62
TUBB3-211ENST00000556536 MLH1P40692 756 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 YARSP54577 528 aaKnown RBP18.92■□□□□ 0.62
TUBB3-211ENST00000556536 MYL5Q02045 173 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 CYP24A1Q07973 514 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 IQCB1Q15051 598 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 TPD52L1Q16890 204 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-211ENST00000556536 ALKAL1Q6UXT8 129 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 FILIP1Q7Z7B0 1213 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 IRF2BP1Q8IU81 584 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 FAM186BQ8IYM0 893 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 PLEKHO2Q8TD55 490 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 FAM212AQ96EL1 285 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 RNPC3Q96LT9 517 aaKnown RBP18.92■□□□□ 0.62
TUBB3-211ENST00000556536 MFSD14AQ96MC6 490 aa18.92■□□□□ 0.62
TUBB3-211ENST00000556536 CDX2Q99626 313 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-211ENST00000556536 SAMSN1Q9NSI8 373 aaKnown RBP18.92■□□□□ 0.62
TUBB3-211ENST00000556536 SLC16A3O15427 465 aaKnown RBP18.91■□□□□ 0.62
TUBB3-211ENST00000556536 SPAG1Q07617 926 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 HSP90AA4PQ58FG1 418 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 XKR4Q5GH76 650 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 GSTCDQ8NEC7 633 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 MAFAQ8NHW3 353 aaPredicted RBP18.91■□□□□ 0.62
TUBB3-211ENST00000556536 BORCS6Q96GS4 357 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 ZMAT2Q96NC0 199 aaKnown RBP18.91■□□□□ 0.62
TUBB3-211ENST00000556536 CASD1Q96PB1 797 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 MKNK1Q9BUB5 465 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 MTIF3Q9H2K0 278 aaKnown RBP18.91■□□□□ 0.62
TUBB3-211ENST00000556536 PDE11AQ9HCR9 933 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 UBN1Q9NPG3 1134 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 TOPORSQ9NS56 1045 aaPredicted RBP18.91■□□□□ 0.62
TUBB3-211ENST00000556536 FANCLQ9NW38 375 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 MIOSQ9NXC5 875 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 INPP5FQ9Y2H2 1132 aa18.91■□□□□ 0.62
TUBB3-211ENST00000556536 PTGESO14684 152 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 IKBKBO14920 756 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 MAPK13O15264 365 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 DGKIO75912 1065 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 EPB41P11171 864 aaKnown RBP18.9■□□□□ 0.62
TUBB3-211ENST00000556536 ATP2A2P16615 1042 aaKnown RBP18.9■□□□□ 0.62
TUBB3-211ENST00000556536 POU5F1Q01860 360 aaKnown RBP18.9■□□□□ 0.62
TUBB3-211ENST00000556536 PPP2R3AQ06190 1150 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 PSMD6Q15008 389 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 GLRA4Q5JXX5 417 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 GLB1LQ6UWU2 654 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 LUZP1Q86V48 1076 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 HERC6Q8IVU3 1022 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 CCDC127Q96BQ5 260 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 FAM84AQ96KN4 292 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 SLC9A7Q96T83 725 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 HSD3B7Q9H2F3 369 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 THAP9Q9H5L6 903 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 PLEKHA5Q9HAU0 1116 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
TUBB3-211ENST00000556536 CNTN3Q9P232 1028 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 PLAGL2Q9UPG8 496 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 MICAL3Q7RTP6 2002 aa18.9■□□□□ 0.62
TUBB3-211ENST00000556536 SMIM28A0A1B0GU29 152 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 TBKBP1A7MCY6 615 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 INPPL1O15357 1258 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 IL18RAPO95256 599 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 GJB5O95377 273 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 FGFR1OPO95684 399 aaKnown RBP18.89■□□□□ 0.61
TUBB3-211ENST00000556536 CAVIN2O95810 425 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 POMCP01189 267 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 SCNN1GP51170 649 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 DLG4P78352 724 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 HSP90AA2PQ14568 343 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-211ENST00000556536 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 NOMO2Q5JPE7 1267 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 CDKAL1Q5VV42 579 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 GAS2L3Q86XJ1 694 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 TMEM130Q8N3G9 435 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 PHOSPHO2Q8TCD6 241 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 FAM200AQ8TCP9 573 aa18.89■□□□□ 0.61
TUBB3-211ENST00000556536 CNOT6LQ96LI5 555 aaKnown RBP18.89■□□□□ 0.61
TUBB3-211ENST00000556536 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.61
TUBB3-211ENST00000556536 TMEM117Q9H0C3 514 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms