RNA–Protein interactions for RNA: ENST00000556478.2

ATL1-209, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 644 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-209ENST00000556478 APBB1IPQ7Z5R6 666 aaPredicted RBP22.31■■□□□ 1.16
ATL1-209ENST00000556478 SUGP1Q8IWZ8 645 aaKnown RBP22.31■■□□□ 1.16
ATL1-209ENST00000556478 ZBTB45Q96K62 511 aaPredicted RBP22.31■■□□□ 1.16
ATL1-209ENST00000556478 NT5C3AQ9H0P0 336 aa22.31■■□□□ 1.16
ATL1-209ENST00000556478 TMEM134Q9H6X4 195 aa22.31■■□□□ 1.16
ATL1-209ENST00000556478 ARHGAP28Q9P2N2 729 aa22.31■■□□□ 1.16
ATL1-209ENST00000556478 PDGFBP01127 241 aaPredicted RBP22.3■■□□□ 1.16
ATL1-209ENST00000556478 HYIQ5T013 277 aa22.3■■□□□ 1.16
ATL1-209ENST00000556478 ARL6IP4Q66PJ3 421 aaKnown RBP22.3■■□□□ 1.16
ATL1-209ENST00000556478 SYT2Q8N9I0 419 aaPredicted RBP22.3■■□□□ 1.16
ATL1-209ENST00000556478 SMG7Q92540 1137 aaKnown RBP22.3■■□□□ 1.16
ATL1-209ENST00000556478 ACSF2Q96CM8 615 aaPredicted RBP22.3■■□□□ 1.16
ATL1-209ENST00000556478 ASIC4Q96FT7 647 aa22.3■■□□□ 1.16
ATL1-209ENST00000556478 TTPALQ9BTX7 342 aa22.3■■□□□ 1.16
ATL1-209ENST00000556478 CCDC94Q9BW85 323 aaPredicted RBP22.3■■□□□ 1.16
ATL1-209ENST00000556478 PIDD1Q9HB75 910 aa22.3■■□□□ 1.16
ATL1-209ENST00000556478 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.3■■□□□ 1.16
ATL1-209ENST00000556478 SORCS3Q9UPU3 1222 aa22.3■■□□□ 1.16
ATL1-209ENST00000556478 ARIH1Q9Y4X5 557 aaPredicted RBP22.3■■□□□ 1.16
ATL1-209ENST00000556478 I3L4J1 428 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 GUCY2CP25092 1073 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 CLCNKBP51801 687 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 YARSP54577 528 aaKnown RBP22.29■■□□□ 1.16
ATL1-209ENST00000556478 SLC12A3P55017 1021 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 GRIN1Q05586 938 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 PSMD5Q16401 504 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 SEZ6Q53EL9 994 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 BMP8AQ7Z5Y6 402 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 ZDHHC14Q8IZN3 488 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 PLCD3Q8N3E9 789 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 PPP1R10Q96QC0 940 aaKnown RBP22.29■■□□□ 1.16
ATL1-209ENST00000556478 FNIP2Q9P278 1114 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 ANKFY1Q9P2R3 1169 aa22.29■■□□□ 1.16
ATL1-209ENST00000556478 RBM19Q9Y4C8 960 aaKnown RBP22.29■■□□□ 1.16
ATL1-209ENST00000556478 NOTCH4Q99466 2003 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 TCHHQ07283 1943 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 B3GAT3O94766 335 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 GBP2P32456 591 aaPredicted RBP22.28■■□□□ 1.16
ATL1-209ENST00000556478 UBA7P41226 1012 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 GRM5P41594 1212 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 MATR3P43243 847 aaKnown RBP eCLIP22.28■■□□□ 1.16
ATL1-209ENST00000556478 STRN3Q13033 797 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 MTMR3Q13615 1198 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 SF3A1Q15459 793 aaKnown RBP22.28■■□□□ 1.16
ATL1-209ENST00000556478 TMEM119Q4V9L6 283 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 IER5LQ5T953 404 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 C15orf39Q6ZRI6 1047 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 FBXL6Q8N531 539 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 RASSF8Q8NHQ8 419 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 CALML4Q96GE6 196 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 PTPRHQ9HD43 1115 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 FOXD4L1Q9NU39 408 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 DPP7Q9UHL4 492 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 USTQ9Y2C2 406 aa22.28■■□□□ 1.16
ATL1-209ENST00000556478 SMIM28A0A1B0GU29 152 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 ADAM12O43184 909 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 PLS3P13797 630 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 BRCC3P46736 316 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 SMTNP53814 917 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 SOX4Q06945 474 aaPredicted RBP22.27■■□□□ 1.16
ATL1-209ENST00000556478 ARSHQ5FYA8 562 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 MPZL3Q6UWV2 235 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 OTOP3Q7RTS5 596 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 GPBP1Q86WP2 473 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 LNX1Q8TBB1 728 aaPredicted RBP22.27■■□□□ 1.16
ATL1-209ENST00000556478 LRRC15Q8TF66 581 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 CLSTN3Q9BQT9 956 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 TIPINQ9BVW5 301 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 C17orf75Q9HAS0 396 aa22.27■■□□□ 1.16
ATL1-209ENST00000556478 VCPP55072 806 aaKnown RBP22.26■■□□□ 1.15
ATL1-209ENST00000556478 CREMQ03060 361 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 CUL4AQ13619 759 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 KARSQ15046 597 aaKnown RBP22.26■■□□□ 1.15
ATL1-209ENST00000556478 LILRA6Q6PI73 481 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 BRAPQ7Z569 592 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 TMEM161BQ8NDZ6 487 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 CMASQ8NFW8 434 aaPredicted RBP22.26■■□□□ 1.15
ATL1-209ENST00000556478 PIK3R5Q8WYR1 880 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 ZNF707Q96C28 371 aaPredicted RBP22.26■■□□□ 1.15
ATL1-209ENST00000556478 ZMAT2Q96NC0 199 aaKnown RBP22.26■■□□□ 1.15
ATL1-209ENST00000556478 ACAP3Q96P50 834 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 PLEKHA4Q9H4M7 779 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 TOPORSQ9NS56 1045 aaPredicted RBP22.26■■□□□ 1.15
ATL1-209ENST00000556478 CLUHO75153 1309 aa22.26■■□□□ 1.15
ATL1-209ENST00000556478 N4BP1O75113 896 aaKnown RBP22.25■■□□□ 1.15
ATL1-209ENST00000556478 MAPTP10636 758 aaKnown RBP22.25■■□□□ 1.15
ATL1-209ENST00000556478 MCF2P10911 925 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 PLCG1P19174 1290 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 ELAVL2Q12926 359 aaKnown RBP22.25■■□□□ 1.15
ATL1-209ENST00000556478 MCM6Q14566 821 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 DCLRE1AQ6PJP8 1040 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 UBALD2Q8IYN6 164 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 C3orf58Q8NDZ4 430 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 ST13P5Q8NFI4 369 aaPredicted RBP22.25■■□□□ 1.15
ATL1-209ENST00000556478 SPIRE2Q8WWL2 714 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 BICD1Q96G01 975 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 AK8Q96MA6 479 aa22.25■■□□□ 1.15
ATL1-209ENST00000556478 NTPCRQ9BSD7 190 aaKnown RBP22.25■■□□□ 1.15
ATL1-209ENST00000556478 ZHX3Q9H4I2 956 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms