RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 GIT2Q14161 759 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 MPP2Q14168 576 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 TRMT10CQ7L0Y3 403 aaKnown RBP9.14□□□□□ -0.95
MARK3-210ENST00000556463 GET4Q7L5D6 327 aaPredicted RBP9.14□□□□□ -0.95
MARK3-210ENST00000556463 RBM12BQ8IXT5 1001 aaKnown RBP9.14□□□□□ -0.95
MARK3-210ENST00000556463 EXOC8Q8IYI6 725 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 SH3RF3Q8TEJ3 882 aaPredicted RBP9.14□□□□□ -0.95
MARK3-210ENST00000556463 DNAJC9Q8WXX5 260 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 CYTH2Q99418 400 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 LRMDAQ9H2I8 198 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 CCDC87Q9NVE4 849 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 PARP2Q9UGN5 583 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 PNMA3Q9UL41 463 aa9.14□□□□□ -0.95
MARK3-210ENST00000556463 RTCBQ9Y3I0 505 aaKnown RBP9.14□□□□□ -0.95
MARK3-210ENST00000556463 SUN1O94901 812 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 LMNB1P20700 586 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ANO7Q6IWH7 933 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ARHGEF26Q96DR7 871 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 RMDN2Q96LZ7 410 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 STK33Q9BYT3 514 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 DNAJC17Q9NVM6 304 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 DDX18Q9NVP1 670 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 ARMCX3Q9UH62 379 aaPredicted RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 LGALS13Q9UHV8 139 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ZMYND8Q9ULU4 1186 aaPredicted RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 RBBP6Q7Z6E9 1792 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 PFASO15067 1338 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 IGKV6D-41A0A0C4DH26 115 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 E9PMD0 336 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 PPP1R11O60927 126 aaPredicted RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 SOX5P35711 763 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 PLTPP55058 493 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 MCL1Q07820 350 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 LBRQ14739 615 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 SPTY2D1Q68D10 685 aaPredicted RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 CLEC4GQ6UXB4 293 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 TAOK1Q7L7X3 1001 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 NELFCDQ8IXH7 590 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 SLC44A5Q8NCS7 719 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 PRPF31Q8WWY3 499 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 FAM136AQ96C01 138 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 DNAJC1Q96KC8 554 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 METTL14Q9HCE5 456 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 FGFR1OP2Q9NVK5 253 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ARHGEF38Q9NXL2 777 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 SNX24Q9Y343 169 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ZNF536O15090 1300 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 SIGLEC16A6NMB1 481 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ANKRD63C9JTQ0 380 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 RASGRF2O14827 1237 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 NPTXRO95502 500 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 RECKO95980 971 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ADCY7P51828 1080 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 CACNA2D1P54289 1103 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 KIF22Q14807 665 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 MTFR1Q15390 333 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 DDB1Q16531 1140 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 RGS9BPQ6ZS82 235 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 APBB1IPQ7Z5R6 666 aaPredicted RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 ZFAND2BQ8WV99 257 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 CELF1Q92879 486 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 TRIM7Q9C029 511 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 TLE6Q9H808 572 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 PFDN4Q9NQP4 134 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 NKX1-2Q9UD57 310 aaPredicted RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 RPL26L1Q9UNX3 145 aaKnown RBP9.13□□□□□ -0.95
MARK3-210ENST00000556463 MYO3BQ8WXR4 1341 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 SYNGAP1Q96PV0 1343 aa9.13□□□□□ -0.95
MARK3-210ENST00000556463 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 TCP11X1B4DZS4 312 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 PEX11AO75192 247 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 VIL1P09327 827 aaKnown RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 GM2AP17900 193 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 NFKBIAP25963 317 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 HIBADHP31937 336 aaKnown RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 COPB2P35606 906 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 CRKLP46109 303 aaKnown RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 BPIFB4P59827 614 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 RRP1BQ14684 758 aaKnown RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 LRRC36Q1X8D7 754 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 TMEM63BQ5T3F8 832 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 MTHFD1LQ6UB35 978 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 VPS36Q86VN1 386 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 SPATA24Q86W54 205 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 ECHDC2Q86YB7 292 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 RELL1Q8IUW5 271 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 MARCH10Q8NA82 808 aaPredicted RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 SPIRE2Q8WWL2 714 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 RUNDC3BQ96NL0 473 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 DHX36Q9H2U1 1008 aaKnown RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 MKNK2Q9HBH9 465 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.95
MARK3-210ENST00000556463 ACTL7BQ9Y614 415 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 MROH7Q68CQ1 1323 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 MIF4GDA9UHW6 222 aaKnown RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 XRCC5P13010 732 aaKnown RBP9.12□□□□□ -0.95
MARK3-210ENST00000556463 CREB1P16220 341 aa9.12□□□□□ -0.95
MARK3-210ENST00000556463 CALB2P22676 271 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms