RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 HAND2P61296 217 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 EXOSC10Q01780 885 aaKnown RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 MYL5Q02045 173 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 CCDC144BQ3MJ40 725 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 CFAP100Q494V2 611 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 CYP4F22Q6NT55 531 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 DHX40Q8IX18 779 aaKnown RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 CCAR2Q8N163 923 aaKnown RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 FBXL16Q8N461 479 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 LINC00301Q8NCQ3 95 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 CNNM3Q8NE01 707 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 FRS2Q8WU20 508 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 MRRFQ96E11 262 aaKnown RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 TIGD1Q96MW7 591 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 GPR101Q96P66 508 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-241ENST00000556374 NOX5Q96PH1 765 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 GPR20Q99678 358 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 GORASP1Q9BQQ3 440 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 ALG1Q9BT22 464 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 NACAP1Q9BZK3 213 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 CNNM1Q9NRU3 951 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 TMOD3Q9NYL9 352 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 MARCH2Q9P0N8 246 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 IFNKQ9P0W0 207 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 CLEC1BQ9P126 229 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 APEX2Q9UBZ4 518 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 NRBP1Q9UHY1 535 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 PCDHA7Q9UN72 937 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 SLX4Q8IY92 1834 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 MAP3K15Q6ZN16 1313 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 PHLPP2Q6ZVD8 1323 aa4.97□□□□□ -1.61
ATXN3-241ENST00000556374 LAMB2P55268 1798 aa4.96□□□□□ -1.61
ATXN3-241ENST00000556374 A0A1B0GTL3 188 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CCDC196A0A1B0GTZ2 297 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 MROH6A6NGR9 719 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CYP27B1O15528 508 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 MAFKO60675 156 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CUTAO60888 179 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 PPP6R2O75170 966 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 ZNF202O95125 648 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CTDNEP1O95476 244 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 STARD3NLO95772 234 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 PCCAP05165 728 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 TOP1P11387 765 aaKnown RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 SLC5A1P13866 664 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 GNAT2P19087 354 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CMA1P23946 247 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CNR2P34972 360 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 MAP2K2P36507 400 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 EVCP57679 992 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 TIMM10P62072 90 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 FAM193AP78312 1265 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 NKX3-2P78367 333 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CCZ1BP86790 482 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CCZ1P86791 482 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 AKAP17AQ02040 695 aaKnown RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 KIF23Q02241 960 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 SSRP1Q08945 709 aaKnown RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 DPCR1Q3MIW9 517 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 EMC4Q5J8M3 183 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 TEX35Q5T0J7 233 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CPZQ66K79 652 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CHST3Q7LGC8 479 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 ATG9AQ7Z3C6 839 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 LRP10Q7Z4F1 713 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 PLEKHH3Q7Z736 793 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 MICU3Q86XE3 530 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 MB21D2Q8IYB1 491 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 ENGASEQ8NFI3 743 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 FBXO18Q8NFZ0 1043 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 PHOSPHO1Q8TCT1 267 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 PIGBQ92521 554 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 DIO2Q92813 273 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 PPP1R13BQ96KQ4 1090 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 KRT23Q9C075 422 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 FTOQ9C0B1 505 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 XPO4Q9C0E2 1151 aaKnown RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 OSBPL5Q9H0X9 879 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 NAPBQ9H115 298 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 RNF41Q9H4P4 317 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 KCND1Q9NSA2 647 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 TRMT1Q9NXH9 659 aaKnown RBP4.96□□□□□ -1.62
ATXN3-241ENST00000556374 INPP5FQ9Y2H2 1132 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CLIC4Q9Y696 253 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 CDHR2Q9BYE9 1310 aa4.96□□□□□ -1.62
ATXN3-241ENST00000556374 DOCK2Q92608 1830 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 POLRMTO00411 1230 aaKnown RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 SH2B2O14492 632 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 IDH1O75874 414 aaKnown RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 BMP15O95972 392 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 CDK11BP21127 795 aaKnown RBP4.95□□□□□ -1.62
ATXN3-241ENST00000556374 RFC4P35249 363 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ADD2P35612 726 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 TDO2P48775 406 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ITGA1P56199 1179 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 UBASH3AP57075 661 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 ADAM17P78536 824 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 MAP3K12Q12852 859 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 GPS2Q13227 327 aa4.95□□□□□ -1.62
ATXN3-241ENST00000556374 TCIRG1Q13488 830 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms