RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PLXNA4Q9HCM2 1894 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 TNFRSF10BO14763 440 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 EPCAMP16422 314 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 LMNB2Q03252 620 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 NONOQ15233 471 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATXN3-236ENST00000556220 PCNX4Q63HM2 1172 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 CABP7Q86V35 215 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 MAML2Q8IZL2 1156 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-236ENST00000556220 SLC39A11Q8N1S5 342 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 LRRC43Q8N309 656 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 SLC44A3Q8N4M1 653 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 TMEM87AQ8NBN3 555 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 OR13H1Q8NG92 308 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 OTUD7AQ8TE49 926 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-236ENST00000556220 CDHR1Q96JP9 859 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 MEGF10Q96KG7 1140 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 PCYT2Q99447 389 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 RNF19AQ9NV58 838 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 ZSWIM5Q9P217 1185 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 NCDNQ9UBB6 729 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 MAD2L2Q9UI95 211 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 CA14Q9ULX7 337 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 GINS2Q9Y248 185 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 IRAK3Q9Y616 596 aa7.84□□□□□ -1.15
ATXN3-236ENST00000556220 NEDD4P46934 1319 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-236ENST00000556220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-236ENST00000556220 ZNF213O14771 459 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 GLULP15104 373 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 TGM1P22735 817 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 CA8P35219 290 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 GIT2Q14161 759 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 DSC3Q14574 896 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 SETDB1Q15047 1291 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 PLCB4Q15147 1175 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 SLC35G1Q2M3R5 365 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 LETM2Q2VYF4 491 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 ZNF528Q3MIS6 628 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 MTHFD1LQ6UB35 978 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 PRR23CQ6ZRP0 262 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 PLPPR4Q7Z2D5 763 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 ZNF589Q86UQ0 364 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-236ENST00000556220 PPFIBP1Q86W92 1011 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 HOMER1Q86YM7 354 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 KIAA0319LQ8IZA0 1049 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 VPS52Q8N1B4 723 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 TRAPPC12Q8WVT3 735 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 TMEM40Q8WWA1 233 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 RSAD2Q8WXG1 361 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 SECISBP2LQ93073 1101 aaKnown RBP7.83□□□□□ -1.16
ATXN3-236ENST00000556220 NXPE3Q969Y0 559 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 EVI5LQ96CN4 794 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 GPRASP2Q96D09 838 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 FAM227BQ96M60 508 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 PIGSQ96S52 555 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 AZI2Q9H6S1 392 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 RIOX1Q9H6W3 641 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 SFXN1Q9H9B4 322 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 STIM2Q9P246 746 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 PPME1Q9Y570 386 aa7.83□□□□□ -1.16
ATXN3-236ENST00000556220 KIAA1671Q9BY89 1806 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 A0A0D9SFI3 127 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 PNMA6FA0A0J9YX94 578 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 NT5C1B-RDH14C9J2C7 533 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 F8W735 103 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-236ENST00000556220 HYAL3O43820 417 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-236ENST00000556220 N4BP1O75113 896 aaKnown RBP7.82□□□□□ -1.16
ATXN3-236ENST00000556220 CTSAP10619 480 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 SRFP11831 508 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 ITGB5P18084 799 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 MX1P20591 662 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 KLRC1P26715 233 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 ALDH7A1P49419 539 aaKnown RBP7.82□□□□□ -1.16
ATXN3-236ENST00000556220 HYAL2Q12891 473 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 NAA30Q147X3 362 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-236ENST00000556220 TMEM164Q5U3C3 297 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 C15orf39Q6ZRI6 1047 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 CAPN12Q6ZSI9 719 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 FAM228AQ86W67 206 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 TICAM2Q86XR7 235 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 ABI1Q8IZP0 508 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 ATRIPQ8WXE1 791 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 AUTS2Q8WXX7 1259 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 SPACA7Q96KW9 195 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 MKNK1Q9BUB5 465 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 ZBP1Q9H171 429 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 EPS15L1Q9UBC2 864 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 FBXO4Q9UKT5 387 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 RNF112Q9ULX5 631 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 TRIM33Q9UPN9 1127 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 PCDHGA2Q9Y5H1 932 aa7.82□□□□□ -1.16
ATXN3-236ENST00000556220 B4E1Z4 1266 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 MEIS2O14770 477 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 MAFGO15525 162 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 CYTH3O43739 400 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 METAP2P50579 478 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 STAT5BP51692 787 aa7.81□□□□□ -1.16
ATXN3-236ENST00000556220 CRYBB1P53674 252 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-236ENST00000556220 POLGP54098 1239 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms