RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 ALG3Q92685 438 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 TRIM7Q9C029 511 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 WDR46O15213 610 aaKnown RBP15.83■□□□□ 0.13
CUX1-215ENST00000556210 GRAP2O75791 330 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 STAM2O75886 525 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 HLA-DRAP01903 254 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 CHN1P15882 459 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 PPP2R5EQ16537 467 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 TATDN1Q6P1N9 297 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 PALM2Q8IXS6 379 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 LENG9Q96B70 501 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 INPP4AQ96PE3 977 aaPredicted RBP15.83■□□□□ 0.13
CUX1-215ENST00000556210 FBXO40Q9UH90 709 aa15.83■□□□□ 0.13
CUX1-215ENST00000556210 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 GOLGA8RI6L899 631 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 EGFRP00533 1210 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 VIL1P09327 827 aaKnown RBP15.83■□□□□ 0.12
CUX1-215ENST00000556210 CYP11B1P15538 503 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 DESP17661 470 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 FECHP22830 423 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 CNTN2Q02246 1040 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 MCPH1Q8NEM0 835 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 CAVIN3Q969G5 261 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 TRIM6Q9C030 488 aaPredicted RBP15.83■□□□□ 0.12
CUX1-215ENST00000556210 GGA3Q9NZ52 723 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 TTLL3Q9Y4R7 772 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 ZNF131P52739 623 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 ITGB3BPQ13352 177 aaPredicted RBP15.83■□□□□ 0.12
CUX1-215ENST00000556210 TRIM50Q86XT4 487 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 FAM49AQ9H0Q0 323 aaPredicted RBP15.83■□□□□ 0.12
CUX1-215ENST00000556210 RIPK3Q9Y572 518 aa15.83■□□□□ 0.12
CUX1-215ENST00000556210 EXOC1LA0A1B0GW35 172 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 ADRB2P07550 413 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 CYP4A22Q5TCH4 519 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 ANKMY2Q8IV38 441 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 SLC5A5Q92911 643 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 AGO4Q9HCK5 861 aaKnown RBP15.82■□□□□ 0.12
CUX1-215ENST00000556210 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 FOXO6A8MYZ6 492 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 EDIL3O43854 480 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 PGK2P07205 417 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 RALAP11233 206 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 PEX19P40855 299 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 ACTR2P61160 394 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 CCDC33Q8N5R6 958 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 ZNF280CQ8ND82 737 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 MKNK1Q9BUB5 465 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 MOV10L1Q9BXT6 1211 aaKnown RBP15.82■□□□□ 0.12
CUX1-215ENST00000556210 NEUROG2Q9H2A3 272 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 CYP3A7-CYP3A51PA0A087WV96 503 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 H7C0C1 242 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 TNNC2P02585 160 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 CYP3A7P24462 503 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 HOXD13P35453 343 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 ATP5OP48047 213 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 IRX4P78413 519 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 KCNT1Q5JUK3 1230 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 ERICH1Q86X53 443 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 RFX6Q8HWS3 928 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 SEC16BQ96JE7 1060 aa15.82■□□□□ 0.12
CUX1-215ENST00000556210 CHRNA3P32297 505 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 BPIFB4P59827 614 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 IFI35P80217 286 aaPredicted RBP15.81■□□□□ 0.12
CUX1-215ENST00000556210 WDR72Q3MJ13 1102 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 FBF1Q8TES7 1133 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 KLF6Q99612 283 aaPredicted RBP15.81■□□□□ 0.12
CUX1-215ENST00000556210 C10orf88Q9H8K7 445 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 ERVK-5Q9HDB9 667 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 NGRNQ9NPE2 291 aaKnown RBP15.81■□□□□ 0.12
CUX1-215ENST00000556210 GGPS1O95749 300 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 SHBGP04278 402 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 BRAFP15056 766 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 YWHAGP61981 247 aaKnown RBP eCLIP15.81■□□□□ 0.12
CUX1-215ENST00000556210 SKOR1P84550 965 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 GPS1Q13098 491 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 ATP8B4Q8TF62 1192 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 MAD1L1Q9Y6D9 718 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 MYH6P13533 1939 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 DCDC2CA8MYV0 355 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 KCTD2Q14681 263 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 PGM5Q15124 567 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 ACAD9Q9H845 621 aa15.81■□□□□ 0.12
CUX1-215ENST00000556210 TJP1Q07157 1748 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 TCRBV7S2A1N4TA0A589 114 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 PODXLO00592 558 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 SFNP31947 248 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 MXRA7P84157 204 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 TMEM62Q0P6H9 643 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 PPP6R3Q5H9R7 873 aaPredicted RBP15.8■□□□□ 0.12
CUX1-215ENST00000556210 ARMC9Q7Z3E5 817 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 ZC3H18Q86VM9 953 aaKnown RBP15.8■□□□□ 0.12
CUX1-215ENST00000556210 RNF169Q8NCN4 708 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 HEXIM2Q96MH2 286 aaKnown RBP15.8■□□□□ 0.12
CUX1-215ENST00000556210 MPHOSPH6Q99547 160 aaKnown RBP15.8■□□□□ 0.12
CUX1-215ENST00000556210 SUFUQ9UMX1 484 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 RASA4BC9J798 803 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 RASA4O43374 803 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 CA4P22748 312 aa15.8■□□□□ 0.12
CUX1-215ENST00000556210 GCKP35557 465 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms