RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 MRPL4Q9BYD3 311 aaKnown RBP23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 NT5C3AQ9H0P0 336 aa23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 SMOC2Q9H3U7 446 aa23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 TMEM134Q9H6X4 195 aa23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 KCNK12Q9HB15 430 aa23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 POLD4Q9HCU8 107 aa23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 TOPORSQ9NS56 1045 aaPredicted RBP23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 CACNG4Q9UBN1 327 aa23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 KCNG1Q9UIX4 513 aa23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 RBM19Q9Y4C8 960 aaKnown RBP23.73■■□□□ 1.39
SDR39U1-216ENST00000556175 H3BQV1 296 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 HIP1RO75146 1068 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 RPL17P18621 184 aaKnown RBP23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 NPTX2P47972 431 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 PSMD5Q16401 504 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 PRSS55Q6UWB4 352 aaPredicted RBP23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 CEP57Q86XR8 500 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 CCDC94Q9BW85 323 aaPredicted RBP23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 PRKD2Q9BZL6 878 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 KMT5AQ9NQR1 393 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 EPS15L1Q9UBC2 864 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 DUSP12Q9UNI6 340 aa23.72■■□□□ 1.39
SDR39U1-216ENST00000556175 PP2D1A8MPX8 630 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 TMEM189-UBE2V1I3L0A0 370 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 ZMYND10O75800 440 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 MYBP10242 640 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 MCM2P49736 904 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 ATP2C1P98194 919 aaPredicted RBP23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 LIN9Q5TKA1 542 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 RINT1Q6NUQ1 792 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 LNX1Q8TBB1 728 aaPredicted RBP23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 TMX3Q96JJ7 454 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 PPP1R10Q96QC0 940 aaKnown RBP23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 ARHGAP28Q9P2N2 729 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 FBXW11Q9UKB1 542 aa23.71■■□□□ 1.39
SDR39U1-216ENST00000556175 GRM5P41594 1212 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 IL17AQ16552 155 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 ZNF568Q3ZCX4 644 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 DCLRE1AQ6PJP8 1040 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 C1orf186Q6ZWK4 172 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 DAW1Q8N136 415 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 NXPE3Q969Y0 559 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 ACO2Q99798 780 aaKnown RBP23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 RUSC1Q9BVN2 902 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 CXCL16Q9H2A7 254 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 SLC38A7Q9NVC3 462 aa23.7■■□□□ 1.38
SDR39U1-216ENST00000556175 TRAPPC3O43617 180 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 B3GAT3O94766 335 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 HNRNPA1P09651 372 aaKnown RBP eCLIP23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 GUCY2CP25092 1073 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 GJB2P29033 226 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 CDC25AP30304 524 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 CLCN5P51795 746 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 ZRSR1Q15695 479 aaKnown RBP23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 GLRA4Q5JXX5 417 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 HYIQ5T013 277 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 ASTLQ6HA08 431 aaPredicted RBP23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 CLSTN3Q9BQT9 956 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 MMTAG2Q9BU76 263 aaKnown RBP23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 CDT1Q9H211 546 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 KCND2Q9NZV8 630 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 FBXL21Q9UKT6 434 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 CACNA1HO95180 2353 aa23.69■■□□□ 1.38
SDR39U1-216ENST00000556175 GALR2O43603 387 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 N4BP1O75113 896 aaKnown RBP23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 MCF2P10911 925 aa23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 SMTNP53814 917 aa23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 MAPK7Q13164 816 aa23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 ARL6IP4Q66PJ3 421 aaKnown RBP23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 CDK5RAP3Q96JB5 506 aa23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 TCHPQ9BT92 498 aa23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 PTPRHQ9HD43 1115 aa23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 ZFP37Q9Y6Q3 630 aaPredicted RBP23.68■■□□□ 1.38
SDR39U1-216ENST00000556175 SMIM28A0A1B0GU29 152 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 FGFR3P22607 806 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 HOXA9P31269 272 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 CLCNKBP51801 687 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 STRN3Q13033 797 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 UPP1Q16831 310 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 PPM1LQ5SGD2 360 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 KCNK18Q7Z418 384 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 TMEM105Q8N8V8 129 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 SPIRE2Q8WWL2 714 aa23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 DDX27Q96GQ7 796 aaKnown RBP23.67■■□□□ 1.38
SDR39U1-216ENST00000556175 VWA3AA6NCI4 1184 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 XYLBO75191 536 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 C8AP07357 584 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 XKR4Q5GH76 650 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 MPZL3Q6UWV2 235 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 GET4Q7L5D6 327 aaPredicted RBP23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 SYT2Q8N9I0 419 aaPredicted RBP23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 ATOH1Q92858 354 aaPredicted RBP23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 ACAP3Q96P50 834 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 MYADMQ96S97 322 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 NTPCRQ9BSD7 190 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 TARS2Q9BW92 718 aaKnown RBP23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 MTRRQ9UBK8 725 aa23.66■■□□□ 1.38
SDR39U1-216ENST00000556175 SMC3Q9UQE7 1217 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms