RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SASS6Q6UVJ0 657 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 SLC9A9Q8IVB4 645 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 CD302Q8IX05 232 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 ZSWIM2Q8NEG5 633 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 TMEM174Q8WUU8 243 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 P2RX5Q93086 422 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 SNX27Q96L92 541 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 SMIM28A0A1B0GU29 152 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 TTC26A0AVF1 554 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 TULP1O00294 542 aaPredicted RBP15.39■□□□□ 0.05
SNX6-206ENST00000556162 SOX1O00570 391 aaPredicted RBP15.39■□□□□ 0.05
SNX6-206ENST00000556162 CCNE1P24864 410 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 TAP1Q03518 808 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 GRIK3Q13003 919 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 ADAM9Q13443 819 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 NFIL3Q16649 462 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 EDRF1Q3B7T1 1238 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 RDH13Q8NBN7 331 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 CLP1Q92989 425 aaKnown RBP15.39■□□□□ 0.05
SNX6-206ENST00000556162 FBXL18Q96ME1 805 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 CXCL16Q9H2A7 254 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 CWH43Q9H720 699 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 AAASQ9NRG9 546 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 DMAC2Q9NW81 257 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 RBAKQ9NYW8 714 aaPredicted RBP15.39■□□□□ 0.05
SNX6-206ENST00000556162 CNTN3Q9P232 1028 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 RWDD3Q9Y3V2 267 aa15.39■□□□□ 0.05
SNX6-206ENST00000556162 LACTBL1A8MY62 500 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 PTGESO14684 152 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 ADRB2P07550 413 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 KCNE1P15382 129 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 NR2F2P24468 414 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 SNRNP35Q16560 246 aaKnown RBP15.38■□□□□ 0.05
SNX6-206ENST00000556162 ZCWPW2Q504Y3 356 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 GLRA4Q5JXX5 417 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 ANKRD40Q6AI12 368 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 ZNF280BQ86YH2 543 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 CBWD2Q8IUF1 395 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 NELFBQ8WX92 580 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 SAMD11Q96NU1 681 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 TGS1Q96RS0 853 aaKnown RBP15.38■□□□□ 0.05
SNX6-206ENST00000556162 ASB7Q9H672 318 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 NRDE2Q9H7Z3 1164 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 DACH1Q9UI36 760 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 PLAGL2Q9UPG8 496 aa15.38■□□□□ 0.05
SNX6-206ENST00000556162 BICDL2A1A5D9 508 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 MEFVO15553 781 aaPredicted RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 ZC3H11AO75152 810 aaKnown RBP eCLIP15.37■□□□□ 0.05
SNX6-206ENST00000556162 DDHD2O94830 711 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 ARHGEF15O94989 841 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 LETM1O95202 739 aaPredicted RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 IL18RAPO95256 599 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 ALDH2P05091 517 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 LAG3P18627 525 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 ALDH7A1P49419 539 aaKnown RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 PAK1Q13153 545 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 FNDC1Q4ZHG4 1894 aaPredicted RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 BRSK2Q8IWQ3 736 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 LRCH3Q96II8 777 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 ZMAT2Q96NC0 199 aaKnown RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 TSPAN18Q96SJ8 248 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 SLC38A7Q9NVC3 462 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 HCSTQ9UBK5 93 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 FRMD4BQ9Y2L6 1034 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 PCDHB12Q9Y5F1 795 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 CARNS1A5YM72 827 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 CETN3O15182 167 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 BMPR1AP36894 532 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 PMS1P54277 932 aaKnown RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 ERVK-21P61565 698 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 FKBP3Q00688 224 aaKnown RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 DPCR1Q3MIW9 517 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 CEP135Q66GS9 1140 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 PPP1R10Q96QC0 940 aaKnown RBP15.37■□□□□ 0.05
SNX6-206ENST00000556162 C17orf80Q9BSJ5 609 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 ZNF576Q9H609 170 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 MTUS1Q9ULD2 1270 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 CTNND2Q9UQB3 1225 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 COL4A6Q14031 1691 aa15.37■□□□□ 0.05
SNX6-206ENST00000556162 TMEM265A0A087WTH1 108 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 TRIM49BA6NDI0 452 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 BCAR1P56945 870 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 SPAG1Q07617 926 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 TUSC3Q13454 348 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 SURF1Q15526 300 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 KCNT2Q6UVM3 1135 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 ZNF558Q96NG5 402 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 TMEM175Q9BSA9 504 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 CERS4Q9HA82 394 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 DNAJB4Q9UDY4 337 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.36■□□□□ 0.05
SNX6-206ENST00000556162 CHD9Q3L8U1 2897 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 GBF1Q92538 1859 aa15.36■□□□□ 0.05
SNX6-206ENST00000556162 XPOTO43592 962 aaKnown RBP15.35■□□□□ 0.05
SNX6-206ENST00000556162 RB1P06400 928 aa15.35■□□□□ 0.05
SNX6-206ENST00000556162 LINC00271P0C7V0 271 aa15.35■□□□□ 0.05
SNX6-206ENST00000556162 CTNNB1P35222 781 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms