RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 GAD1Q99259 594 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ANP32EQ9BTT0 268 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 VN1R3Q9BXE9 311 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 SLC6A16Q9GZN6 736 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ADAM7Q9H2U9 754 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 POMKQ9H5K3 350 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 UBN1Q9NPG3 1134 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 GPRC5CQ9NQ84 441 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 NR2E1Q9Y466 385 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 MTCL1Q9Y4B5 1905 aaKnown RBP7.42□□□□□ -1.22
PSEN1-216ENST00000556066 MYH11P35749 1972 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 DMDP11532 3685 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 ARHGEF35A5YM69 484 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 ARL5CA6NH57 179 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 NRP1O14786 923 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 AXIN1O15169 862 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 MED24O75448 989 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 NPTXRO95502 500 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 URODP06132 367 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 OR52Z1P0C646 297 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 SPATA31C1P0DKV0 1188 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 MYBP10242 640 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 ARF4P18085 180 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 LIG1P18858 919 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 AKAP5P24588 427 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 MTHFRP42898 656 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 SCNN1GP51170 649 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 FOXC1Q12948 553 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 PCBP1Q15365 356 aaKnown RBP eCLIP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 PTPN14Q15678 1187 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 ATAT1Q5SQI0 421 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 TMC5Q6UXY8 1006 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 SUGP1Q8IWZ8 645 aaKnown RBP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 ERMNQ8TAM6 284 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 CCDC51Q96ER9 411 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 ZFP42Q96MM3 310 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 NECTIN4Q96NY8 510 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 KLHL5Q96PQ7 755 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 NACC1Q96RE7 527 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 LLPHQ9BRT6 129 aaKnown RBP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 TMEM175Q9BSA9 504 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 EMILIN2Q9BXX0 1053 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 CSRNP2Q9H175 543 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 NXF3Q9H4D5 531 aaKnown RBP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 TUFT1Q9NNX1 390 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 MRPL17Q9NRX2 175 aaKnown RBP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 KLK14Q9P0G3 267 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 PARP2Q9UGN5 583 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 DBR1Q9UK59 544 aaKnown RBP7.41□□□□□ -1.22
PSEN1-216ENST00000556066 IRAK3Q9Y616 596 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 DENND4AQ7Z401 1863 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 KMT2EQ8IZD2 1858 aa7.41□□□□□ -1.22
PSEN1-216ENST00000556066 C2CD4DB7Z1M9 353 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 F8W810 466 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 TRAK2O60296 914 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 ASGR2P07307 311 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 CNPP09543 421 aaKnown RBP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 XRCC6P12956 609 aaKnown RBP eCLIP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 CCT6AP40227 531 aaKnown RBP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 HMGN5P82970 282 aaKnown RBP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 POU5F1BQ06416 359 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 SIGLEC14Q08ET2 396 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 TCF15Q12870 199 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 PTPN21Q16825 1174 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 MSS51Q4VC12 460 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 TTC38Q5R3I4 469 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 SLC27A1Q6PCB7 646 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 TAS1R1Q7RTX1 841 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 GLYCTKQ8IVS8 523 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 ZBTB8OSQ8IWT0 167 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 COLGALT2Q8IYK4 626 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 CYP4X1Q8N118 509 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 TDRD5Q8NAT2 981 aaKnown RBP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 KREMEN2Q8NCW0 462 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 MCPH1Q8NEM0 835 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 FBXO18Q8NFZ0 1043 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 SLC22A17Q8WUG5 538 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 TSC1Q92574 1164 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 RABGGTAQ92696 567 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 B3GALT6Q96L58 329 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 ZSCAN31Q96LW9 406 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 RPS6KC1Q96S38 1066 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 SPSB2Q99619 263 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 COLEC11Q9BWP8 271 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 FOXP1Q9H334 677 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 POLD4Q9HCU8 107 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 MARCH5Q9NX47 278 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 MIOSQ9NXC5 875 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 STK39Q9UEW8 545 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 NOL7Q9UMY1 257 aaKnown RBP7.4□□□□□ -1.22
PSEN1-216ENST00000556066 GIT1Q9Y2X7 761 aa7.4□□□□□ -1.22
PSEN1-216ENST00000556066 DOCK6Q96HP0 2047 aa7.4□□□□□ -1.23
PSEN1-216ENST00000556066 MYO15AQ9UKN7 3530 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 CACNA1GO43497 2377 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 CACNA1BQ00975 2339 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 CITO14578 2027 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms