RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 MEGF9Q9H1U4 602 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 VPS11Q9H270 941 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
ATXN3-233ENST00000555816 CPA4Q9UI42 421 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 AOX1Q06278 1338 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 TRIOBPQ9H2D6 2365 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 TCP10L2B9ZVM9 353 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 SNAP23O00161 211 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
ATXN3-233ENST00000555816 CKMP06732 381 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 CTGFP29279 349 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 GNAI1P63096 354 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
ATXN3-233ENST00000555816 PPATQ06203 517 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 TUSC3Q13454 348 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 RALBP1Q15311 655 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-233ENST00000555816 ANKRD23Q86SG2 305 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 CKAP2LQ8IYA6 745 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 IFNL3Q8IZI9 196 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 Q8N1X5 172 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 NUDT10Q8NFP7 164 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.13□□□□□ -1.43
ATXN3-233ENST00000555816 NUDT11Q96G61 164 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 GDF15Q99988 308 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 MRIQ9BWK5 157 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 TMEM39BQ9GZU3 492 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 KCND1Q9NSA2 647 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 ARHGAP20Q9P2F6 1191 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 FAM205AQ6ZU69 1335 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 MYPNQ86TC9 1320 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 TAF1P21675 1872 aa6.13□□□□□ -1.43
ATXN3-233ENST00000555816 FAM47E-STBD1D6RA91 191 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 H0Y858 1186 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 PDHXO00330 501 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 MSCO60682 206 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 CUTAO60888 179 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 CNOT4O95628 575 aaKnown RBP6.12□□□□□ -1.43
ATXN3-233ENST00000555816 GNAT1P11488 350 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 GRK2P25098 689 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 GRK3P35626 688 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 LAMB2P55268 1798 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 GPR85P60893 370 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 IFIT5Q13325 482 aaKnown RBP6.12□□□□□ -1.43
ATXN3-233ENST00000555816 GCKRQ14397 625 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 SKIDA1Q1XH10 827 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 LRIT3Q3SXY7 679 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 MFSD14BQ5SR56 506 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 ZNF585AQ6P3V2 769 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
ATXN3-233ENST00000555816 C8orf58Q8NAV2 365 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 TDRD7Q8NHU6 1098 aaKnown RBP6.12□□□□□ -1.43
ATXN3-233ENST00000555816 HNRNPLLQ8WVV9 542 aaKnown RBP6.12□□□□□ -1.43
ATXN3-233ENST00000555816 ZKSCAN4Q969J2 545 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-233ENST00000555816 ZNF669Q96BR6 464 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-233ENST00000555816 LMF1Q96S06 567 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 MSL2Q9HCI7 577 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 DSEQ9UL01 958 aa6.12□□□□□ -1.43
ATXN3-233ENST00000555816 ADCY3O60266 1144 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 AMHP03971 560 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 PFKPQ01813 784 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 PRKCZQ05513 592 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 GRIN1Q05586 938 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 SERINC3Q13530 473 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 RAB33AQ14088 237 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 USP10Q14694 798 aaKnown RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 PRKD1Q15139 912 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 FKBP1CQ5VVH2 108 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 NECAB2Q7Z6G3 386 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 NLGN4XQ8N0W4 816 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 ST13P5Q8NFI4 369 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 EDAQ92838 391 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 PAWRQ96IZ0 340 aaKnown RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 DEFB118Q96PH6 123 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 PARK7Q99497 189 aaKnown RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 AARSD1Q9BTE6 412 aaKnown RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 ZNF341Q9BYN7 854 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 SCAND2PQ9GZW5 306 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-233ENST00000555816 ZFP69BQ9UJL9 534 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 HTTP42858 3142 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 SZT2Q5T011 3432 aa6.11□□□□□ -1.43
ATXN3-233ENST00000555816 ZNF839A8K0R7 811 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 CXCL11O14625 94 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 PLIN1O60240 522 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 CSF2RBP32927 897 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 FLT3LGP49771 235 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 PURAQ00577 322 aaKnown RBP6.1□□□□□ -1.43
ATXN3-233ENST00000555816 UBE4AQ14139 1066 aa6.1□□□□□ -1.43
ATXN3-233ENST00000555816 WDR43Q15061 677 aaKnown RBP eCLIP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms