RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 AGMOQ6ZNB7 445 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 NT5DC4Q86YG4 428 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 TMEM192Q8IY95 271 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 RNF169Q8NCN4 708 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 ANKRD20A12PQ8NF67 263 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 PHOSPHO2Q8TCD6 241 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 APOL6Q9BWW8 343 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 RSAD1Q9HA92 442 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 SAMSN1Q9NSI8 373 aaKnown RBP13.54□□□□□ -0.24
SHMT2-221ENST00000555773 KANSL3Q9P2N6 904 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 DERAQ9Y315 318 aa13.54□□□□□ -0.24
SHMT2-221ENST00000555773 ZBBXA8MT70 800 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 LACTBL1A8MY62 500 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 H0YGN5 161 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 STX10O60499 249 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 OFD1O75665 1012 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 CXCL8P10145 99 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 KCNE1P15382 129 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 ZNF18P17022 549 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 VAMP7P51809 220 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 AP3M2P53677 418 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 CLDN10P78369 228 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 MLLT1Q03111 559 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-221ENST00000555773 BFSP1Q12934 665 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 TCP11X2Q5H9J9 407 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 RASIP1Q5U651 963 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 LUZP1Q86V48 1076 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 GAS2L3Q86XJ1 694 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 PARD3BQ8TEW8 1205 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 CACTINQ8WUQ7 758 aaKnown RBP13.53□□□□□ -0.24
SHMT2-221ENST00000555773 FAM212AQ96EL1 285 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 SNX27Q96L92 541 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 FNBP1Q96RU3 617 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 GDF15Q99988 308 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 CNTN3Q9P232 1028 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 SLC4A7Q9Y6M7 1214 aa13.53□□□□□ -0.24
SHMT2-221ENST00000555773 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 ARL5CA6NH57 179 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 KCNJ18B7U540 433 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 GTF2H1P32780 548 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 BMP8BP34820 402 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 KCNJ12Q14500 433 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 DUOXA2Q1HG44 320 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 CREBRFQ8IUR6 639 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 TRIM59Q8IWR1 403 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 LPPQ93052 612 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 CCDC127Q96BQ5 260 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
SHMT2-221ENST00000555773 RPS6KC1Q96S38 1066 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 SLC9A7Q96T83 725 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 GAD1Q99259 594 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 TMEM117Q9H0C3 514 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 PDE11AQ9HCR9 933 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 LIMA1Q9UHB6 759 aaKnown RBP13.52□□□□□ -0.25
SHMT2-221ENST00000555773 C2CD2Q9Y426 696 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 TET1Q8NFU7 2136 aa13.52□□□□□ -0.25
SHMT2-221ENST00000555773 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 SIP14410 1827 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 MEIS3P2A8K0S8 358 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 RBAK-RBAKDNI3L0D1 243 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 MEFVO15553 781 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-221ENST00000555773 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
SHMT2-221ENST00000555773 DGKIO75912 1065 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 THP07101 528 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 TPM2P07951 284 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 TNNI1P19237 187 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 CYP3A5P20815 502 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-221ENST00000555773 MTIF2P46199 727 aaKnown RBP13.51□□□□□ -0.25
SHMT2-221ENST00000555773 ZBTB6Q15916 424 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 WDR49Q8IV35 697 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 URGCPQ8TCY9 931 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 CGRRF1Q99675 332 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
SHMT2-221ENST00000555773 RBSNQ9H1K0 784 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 SLC38A7Q9NVC3 462 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 KLK14Q9P0G3 267 aa13.51□□□□□ -0.25
SHMT2-221ENST00000555773 CXXC1Q9P0U4 656 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-221ENST00000555773 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.51□□□□□ -0.25
SHMT2-221ENST00000555773 PMM2O15305 246 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 UPP2O95045 317 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 DLATP10515 647 aaKnown RBP13.5□□□□□ -0.25
SHMT2-221ENST00000555773 FGFR1P11362 822 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 MLH1P40692 756 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 DEFB103AP81534 67 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 SHHQ15465 462 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 MAN2A1Q16706 1144 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 UVSSAQ2YD98 709 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 CLLU1OSQ5K130 101 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 JADE1Q6IE81 842 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 PLEKHO2Q8TD55 490 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 HELQQ8TDG4 1101 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
SHMT2-221ENST00000555773 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms