RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
EFCAB11-207ENST00000555608 MTCL1Q9Y4B5 1905 aaKnown RBP16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■■■■ 124.1
EFCAB11-207ENST00000555608 PRR33A8MZF0 331 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 MAPTP10636 758 aaKnown RBP16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 PROZP22891 400 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 STRN3Q13033 797 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 SEZ6Q53EL9 994 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 HERC4Q5GLZ8 1057 aaPredicted RBP16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 RTP2Q5QGT7 225 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 MPZL3Q6UWV2 235 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 APBB1IPQ7Z5R6 666 aaPredicted RBP16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 KCTD17Q8N5Z5 321 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 SPIRE2Q8WWL2 714 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 PPP1R10Q96QC0 940 aaKnown RBP16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 SFXN1Q9H9B4 322 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 CHST7Q9NS84 486 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 KCND2Q9NZV8 630 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 SSX2IPQ9Y2D8 614 aa16.29■□□□□ 0.2
EFCAB11-207ENST00000555608 C2CD4DB7Z1M9 353 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 K7ENM7 598 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 SLC26A4O43511 780 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 STX6O43752 255 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 FAM13AO94988 1023 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 KRT18P05783 430 aaKnown RBP16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 ADH1AP07327 375 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 SPATA31D3P0C874 917 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 MCF2P10911 925 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 MTHFRP42898 656 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 SMTNP53814 917 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 YARSP54577 528 aaKnown RBP16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 NCKAP1LP55160 1127 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 SOX4Q06945 474 aaPredicted RBP16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 NOLC1Q14978 699 aaKnown RBP eCLIP16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 SPATA31D4Q6ZUB0 917 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 CEP57Q86XR8 500 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 PALB2Q86YC2 1186 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 LARP4BQ92615 738 aaKnown RBP16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 SNX27Q96L92 541 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 RIPOR3Q96MK2 946 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 NTPCRQ9BSD7 190 aaKnown RBP16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 ZHX3Q9H4I2 956 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 RXFP1Q9HBX9 757 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 ODF2LQ9ULJ1 636 aa16.28■□□□□ 0.2
EFCAB11-207ENST00000555608 GLUD1P00367 558 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 CLCNKBP51801 687 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 FAM171A1Q5VUB5 890 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 FOXD4L5Q5VV16 416 aaPredicted RBP16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 TMEM130Q8N3G9 435 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 MYCT1Q8N699 235 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 C3orf58Q8NDZ4 430 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 FOXD4L4Q8WXT5 416 aaPredicted RBP16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 BICD1Q96G01 975 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 ZMAT2Q96NC0 199 aaKnown RBP16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 NECTIN4Q96NY8 510 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 HAPLN2Q9GZV7 340 aa16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 LARSQ9P2J5 1176 aaKnown RBP16.27■□□□□ 0.2
EFCAB11-207ENST00000555608 SMIM28A0A1B0GU29 152 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 I3L4J1 428 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 TOM1L1O75674 476 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 RFPL2O75678 378 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 MATR3P43243 847 aaKnown RBP eCLIP16.26■□□□□ 0.191e-7■■■□□ 18.9
EFCAB11-207ENST00000555608 BRCC3P46736 316 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 HAUS6Q7Z4H7 955 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 GPR149Q86SP6 731 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 SNX21Q969T3 373 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 ACAP3Q96P50 834 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 TOPORSQ9NS56 1045 aaPredicted RBP16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 NR2E1Q9Y466 385 aa16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 SRPRBQ9Y5M8 271 aaKnown RBP16.26■□□□□ 0.19
EFCAB11-207ENST00000555608 TGM5O43548 720 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 BRD1O95696 1058 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 ZNF131P52739 623 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 PSMD5Q16401 504 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 ATAT1Q5SQI0 421 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 CD300LGQ6UXG3 332 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 ALKAL1Q6UXT8 129 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 TDRD5Q8NAT2 981 aaKnown RBP16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 C18orf25Q96B23 403 aaPredicted RBP16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 TTPALQ9BTX7 342 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 PARVGQ9HBI0 331 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 FNIP2Q9P278 1114 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 ARIH1Q9Y4X5 557 aaPredicted RBP16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 ANK1P16157 1881 aa16.25■□□□□ 0.19
EFCAB11-207ENST00000555608 A0A087X0B3 334 aa16.24■□□□□ 0.19
EFCAB11-207ENST00000555608 TMEM189-UBE2V1I3L0A0 370 aa16.24■□□□□ 0.19
EFCAB11-207ENST00000555608 ADAM12O43184 909 aa16.24■□□□□ 0.19
EFCAB11-207ENST00000555608 B3GAT3O94766 335 aa16.24■□□□□ 0.19
EFCAB11-207ENST00000555608 CXCL8P10145 99 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms