RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SPATA31D4Q6ZUB0 917 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 Q6ZVL8 140 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 HOMER1Q86YM7 354 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 ZFP28Q8NHY6 868 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 RNF7Q9UBF6 113 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 RPTORQ8N122 1335 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 MGST3O14880 152 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 CDKL5O76039 1030 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 HLA-DOAP06340 250 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 ITGAMP11215 1152 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 CLRN1P58418 232 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 SIM1P81133 766 aaPredicted RBP5.28□□□□□ -1.56
SNX6-204ENST00000555541 ZNF169Q14929 603 aaPredicted RBP5.28□□□□□ -1.56
SNX6-204ENST00000555541 MST1LQ2TV78 715 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 ZNF572Q7Z3I7 529 aaPredicted RBP5.28□□□□□ -1.56
SNX6-204ENST00000555541 MAPKAPK5Q8IW41 473 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 TRMT2AQ8IZ69 625 aaKnown RBP5.28□□□□□ -1.56
SNX6-204ENST00000555541 PPM1KQ8N3J5 372 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 OR56A1Q8NGH5 318 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 SLC5A5Q92911 643 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 EAF2Q96CJ1 260 aaPredicted RBP5.28□□□□□ -1.56
SNX6-204ENST00000555541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNX6-204ENST00000555541 TMEM74BQ9NUR3 256 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 FOXJ2Q9P0K8 574 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 EDARQ9UNE0 448 aa5.28□□□□□ -1.56
SNX6-204ENST00000555541 A0A087X0B3 334 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 CGB1A6NKQ9 187 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 GSG1L2A8MUP6 293 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 IGLV2-14P01704 120 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 ALOX15P16050 662 aaPredicted RBP5.27□□□□□ -1.57
SNX6-204ENST00000555541 RARRES1P49788 294 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 DDB1Q16531 1140 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 ATXN7L2Q5T6C5 722 aaPredicted RBP5.27□□□□□ -1.57
SNX6-204ENST00000555541 ARMC6Q6NXE6 501 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 PDZD4Q76G19 769 aaPredicted RBP5.27□□□□□ -1.57
SNX6-204ENST00000555541 AHI1Q8N157 1196 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 OR2W6PQ8NHA6 318 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 ZNF480Q8WV37 535 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 UBXN4Q92575 508 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 SLC9A6Q92581 669 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 NACC2Q96BF6 587 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 DRC1Q96MC2 740 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 Q96MF0 132 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 TOPORSQ9NS56 1045 aaPredicted RBP5.27□□□□□ -1.57
SNX6-204ENST00000555541 FANCLQ9NW38 375 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 SCOCQ9UIL1 159 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 KCNG1Q9UIX4 513 aa5.27□□□□□ -1.57
SNX6-204ENST00000555541 FOSP01100 380 aaPredicted RBP5.26□□□□□ -1.57
SNX6-204ENST00000555541 BPIP17213 487 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 IL2P60568 153 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 OCA2Q04671 838 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 TSHZ3Q63HK5 1081 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 SP5Q6BEB4 398 aaPredicted RBP5.26□□□□□ -1.57
SNX6-204ENST00000555541 SLC44A3Q8N4M1 653 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 SPATA5L1Q9BVQ7 753 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 SEMA4GQ9NTN9 838 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 FAM30AQ9NZY2 134 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 ATP11BQ9Y2G3 1177 aa5.26□□□□□ -1.57
SNX6-204ENST00000555541 NOC2LQ9Y3T9 749 aaKnown RBP5.26□□□□□ -1.57
SNX6-204ENST00000555541 PRSS23O95084 383 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 SART3Q15020 963 aaKnown RBP5.25□□□□□ -1.57
SNX6-204ENST00000555541 FSCN1Q16658 493 aaKnown RBP5.25□□□□□ -1.57
SNX6-204ENST00000555541 ERCC6LQ2NKX8 1250 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 Q6ZNX1 250 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 MED25Q71SY5 747 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 CAGE1Q8TC20 777 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 TSPEARQ8WU66 669 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 RIN2Q8WYP3 895 aaPredicted RBP5.25□□□□□ -1.57
SNX6-204ENST00000555541 SMG7Q92540 1137 aaKnown RBP5.25□□□□□ -1.57
SNX6-204ENST00000555541 APPBP2Q92624 585 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 HOXB13Q92826 284 aaPredicted RBP5.25□□□□□ -1.57
SNX6-204ENST00000555541 BOD1Q96IK1 185 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 PDLIM2Q96JY6 352 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 ZSWIM1Q9BR11 485 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 RNF181Q9P0P0 153 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 TLK1Q9UKI8 766 aa5.25□□□□□ -1.57
SNX6-204ENST00000555541 PHF2O75151 1096 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 SNRPA1P09661 255 aaKnown RBP5.24□□□□□ -1.57
SNX6-204ENST00000555541 FDXRP22570 491 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 ADSLP30566 484 aaPredicted RBP5.24□□□□□ -1.57
SNX6-204ENST00000555541 SREBF1P36956 1147 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 UGT8Q16880 541 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 GPR156Q8NFN8 814 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 OR7D4Q8NG98 312 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 PAWRQ96IZ0 340 aaKnown RBP5.24□□□□□ -1.57
SNX6-204ENST00000555541 ALOXE3Q9BYJ1 711 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 BCO1Q9HAY6 547 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 SIK3Q9Y2K2 1263 aa5.24□□□□□ -1.57
SNX6-204ENST00000555541 A0A1B0GTW7 788 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 LRRC3CA6NJW4 275 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 RAB11FIP3O75154 756 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 GCSHP23434 173 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 PTPN7P35236 360 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 ID4P47928 161 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 PPP3CAQ08209 521 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 KIAA0907Q7Z7F0 614 aaPredicted RBP5.23□□□□□ -1.57
SNX6-204ENST00000555541 C11orf74Q86VG3 221 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 CLRN3Q8NCR9 226 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 FBXO18Q8NFZ0 1043 aa5.23□□□□□ -1.57
SNX6-204ENST00000555541 MFSD3Q96ES6 412 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms