RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GOLGA8IPA6NC78 632 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 GOLGA8JA6NMD2 632 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 GRXCR1A8MXD5 290 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 LACTBL1A8MY62 500 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 PTGESO14684 152 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CETN3O15182 167 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 TLL1O43897 1013 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 EXOC3O60645 756 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 AKAP3O75969 853 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CXCL8P10145 99 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 MLH1P40692 756 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CASP4P49662 377 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 GATMP50440 423 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CYP2J2P51589 502 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 SMAD3P84022 425 aaKnown RBP13.79□□□□□ -0.2
SYNE2-219ENST00000555323 SURF1Q15526 300 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 SNRNP35Q16560 246 aaKnown RBP13.79□□□□□ -0.2
SYNE2-219ENST00000555323 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 LRRC55Q6ZSA7 311 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 ENOX1Q8TC92 643 aaKnown RBP13.79□□□□□ -0.2
SYNE2-219ENST00000555323 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 ZFP42Q96MM3 310 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CEP63Q96MT8 703 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 ZMAT2Q96NC0 199 aaKnown RBP13.79□□□□□ -0.2
SYNE2-219ENST00000555323 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 MRPL9Q9BYD2 267 aaKnown RBP13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CXCL16Q9H2A7 254 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 KLK14Q9P0G3 267 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 CTNND2Q9UQB3 1225 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 DERAQ9Y315 318 aa13.79□□□□□ -0.2
SYNE2-219ENST00000555323 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
SYNE2-219ENST00000555323 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 IL18RAPO95256 599 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 THP07101 528 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 LINC00271P0C7V0 271 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 PSMC2P35998 433 aaKnown RBP13.78□□□□□ -0.2
SYNE2-219ENST00000555323 RABGGTBP53611 331 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 STX17P56962 302 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 CLDN10P78369 228 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 PPP2R3AQ06190 1150 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 DSC1Q08554 894 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 GRIK3Q13003 919 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 NAB2Q15742 525 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 RDH13Q8NBN7 331 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 URGCPQ8TCY9 931 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 CLP1Q92989 425 aaKnown RBP13.78□□□□□ -0.2
SYNE2-219ENST00000555323 PPP1R10Q96QC0 940 aaKnown RBP13.78□□□□□ -0.2
SYNE2-219ENST00000555323 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
SYNE2-219ENST00000555323 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
SYNE2-219ENST00000555323 RANBP2P49792 3224 aaKnown RBP13.78□□□□□ -0.2
SYNE2-219ENST00000555323 DDHD2O94830 711 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
SYNE2-219ENST00000555323 CAVIN2O95810 425 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 CYP3A5P20815 502 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 IBSPP21815 317 aaPredicted RBP13.77□□□□□ -0.21
SYNE2-219ENST00000555323 SCNN1GP51170 649 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 MARSP56192 900 aaKnown RBP13.77□□□□□ -0.21
SYNE2-219ENST00000555323 WNT7BP56706 349 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 CYP24A1Q07973 514 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 PTPRSQ13332 1948 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 COL4A6Q14031 1691 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 BTG3Q14201 252 aaPredicted RBP13.77□□□□□ -0.21
SYNE2-219ENST00000555323 PSMD6Q15008 389 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 RAB30Q15771 203 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 C11orf57Q6ZUT1 292 aaPredicted RBP13.77□□□□□ -0.21
SYNE2-219ENST00000555323 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 LRRC43Q8N309 656 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 CSGALNACT2Q8N6G5 542 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 TMC2Q8TDI7 906 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 PARD3BQ8TEW8 1205 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 RPS6KC1Q96S38 1066 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 BPIFA3Q9BQP9 254 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 SRRTQ9BXP5 876 aaKnown RBP13.77□□□□□ -0.21
SYNE2-219ENST00000555323 GZF1Q9H116 711 aaPredicted RBP13.77□□□□□ -0.21
SYNE2-219ENST00000555323 CWH43Q9H720 699 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
SYNE2-219ENST00000555323 LCHNA4D1U4 455 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 CARNS1A5YM72 827 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 IKBKBO14920 756 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
SYNE2-219ENST00000555323 GNA14O95837 355 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 POMCP01189 267 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 MYOGP15173 224 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 PBX2P40425 430 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 INTS8Q75QN2 995 aaKnown RBP13.76□□□□□ -0.21
SYNE2-219ENST00000555323 FRMD5Q7Z6J6 570 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 TMEM175Q9BSA9 504 aa13.76□□□□□ -0.21
SYNE2-219ENST00000555323 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
SYNE2-219ENST00000555323 DNAJC25Q9H1X3 360 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms