RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 CACNG4Q9UBN1 327 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 GPR182O15218 404 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 EXTL3O43909 919 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 CXCL10P02778 98 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 RAG1P15918 1043 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 CDC25BP30305 580 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 GATMP50440 423 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 CYP24A1Q07973 514 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 PPP3CAQ08209 521 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 CBWD6Q4V339 395 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 CBWD3Q5JTY5 395 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 CBWD5Q5RIA9 395 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 ZMAT2Q96NC0 199 aaKnown RBP11.7□□□□□ -0.54
TDP1-211ENST00000555178 MIOSQ9NXC5 875 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 PLAGL2Q9UPG8 496 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
TDP1-211ENST00000555178 COL4A6Q14031 1691 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
TDP1-211ENST00000555178 LACTBL1A8MY62 500 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 ENPP3O14638 875 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 EPHB6O15197 1021 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 DLATP10515 647 aaKnown RBP11.69□□□□□ -0.54
TDP1-211ENST00000555178 MCF2P10911 925 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 SYCP1Q15431 976 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 CHD9Q3L8U1 2897 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 SLFN12LQ6IEE8 588 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 AGMOQ6ZNB7 445 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 EFCAB13Q8IY85 973 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 RNF169Q8NCN4 708 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 OR5B17Q8NGF7 314 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 MFSD14AQ96MC6 490 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.69□□□□□ -0.542e-9■■■■■ 223.6
TDP1-211ENST00000555178 FAM105AQ9NUU6 356 aa11.69□□□□□ -0.54
TDP1-211ENST00000555178 C9IYK1 514 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 RECQL4O94761 1208 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 GCLMP48507 274 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 VAMP7P51809 220 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 GLRA4Q5JXX5 417 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 PARD3BQ8TEW8 1205 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
TDP1-211ENST00000555178 RBAKQ9NYW8 714 aaPredicted RBP11.68□□□□□ -0.54
TDP1-211ENST00000555178 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 CHD7Q9P2D1 2997 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 RNF225M0QZC1 329 aaPredicted RBP11.68□□□□□ -0.54
TDP1-211ENST00000555178 AFPP02771 609 aaKnown RBP11.68□□□□□ -0.54
TDP1-211ENST00000555178 AXLP30530 894 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 KCNMA1Q12791 1236 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 INTS8Q75QN2 995 aaKnown RBP11.68□□□□□ -0.54
TDP1-211ENST00000555178 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.68□□□□□ -0.54
TDP1-211ENST00000555178 GSTCDQ8NEC7 633 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 DPF3Q92784 378 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 SIK3Q9Y2K2 1263 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 SQORQ9Y6N5 450 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 GBF1Q92538 1859 aa11.68□□□□□ -0.54
TDP1-211ENST00000555178 PDE4DIPQ5VU43 2346 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 TTC26A0AVF1 554 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 ZNF233A6NK53 670 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 EVI5O60447 810 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 B4GALT3O60512 393 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 RPLP2P05387 115 aaKnown RBP11.67□□□□□ -0.54
TDP1-211ENST00000555178 TPM3P06753 285 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 TPM2P07951 284 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 NFICP08651 508 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 FGFR1P11362 822 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 ACTN1P12814 892 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 KRT13P13646 458 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 GRM5P41594 1212 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 FMO5P49326 533 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 SPECC1LQ69YQ0 1117 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 ZNF598Q86UK7 904 aaKnown RBP11.67□□□□□ -0.54
TDP1-211ENST00000555178 ECHDC2Q86YB7 292 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 GPIHBP1Q8IV16 184 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 BRSK2Q8IWQ3 736 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 USP38Q8NB14 1042 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 CPLX3Q8WVH0 158 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 RABGGTAQ92696 567 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 C18orf25Q96B23 403 aaPredicted RBP11.67□□□□□ -0.54
TDP1-211ENST00000555178 ZNF830Q96NB3 372 aaPredicted RBP11.67□□□□□ -0.54
TDP1-211ENST00000555178 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
TDP1-211ENST00000555178 PTGESO14684 152 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 GYPCP04921 128 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 DEFB103AP81534 67 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 FKBP15Q5T1M5 1219 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 JADE1Q6IE81 842 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 ALKAL1Q6UXT8 129 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 OTOP2Q7RTS6 562 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 CRIPAKQ8N1N5 446 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
TDP1-211ENST00000555178 TRIM6Q9C030 488 aaPredicted RBP11.67□□□□□ -0.54
TDP1-211ENST00000555178 TSPYL2Q9H2G4 693 aaPredicted RBP11.67□□□□□ -0.54
TDP1-211ENST00000555178 GOLGA2P5Q9HBQ8 144 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms