RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ADAM22Q9P0K1 906 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 SEL1LQ9UBV2 794 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 PARP2Q9UGN5 583 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 TPX2Q9ULW0 747 aaKnown RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 STK24Q9Y6E0 443 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 FRMPD4Q14CM0 1322 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 LRRD1A4D1F6 860 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 PODXLO00592 558 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 PLS3P13797 630 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 VCAM1P19320 739 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 CETN2P41208 172 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 TRAF1Q13077 416 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 SMTNL2Q2TAL5 461 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 BRDTQ58F21 947 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 MKL1Q969V6 931 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 CCDC77Q9BR77 488 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 ZWILCHQ9H900 591 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
XRCC3-208ENST00000554811 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 STXBP5LQ9Y2K9 1186 aa12.66□□□□□ -0.38
XRCC3-208ENST00000554811 EXOC1LA0A1B0GW35 172 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 CCT8L1PA6NM43 557 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 SGK1O00141 431 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 RIPK2O43353 540 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 SKAP2O75563 359 aaPredicted RBP12.65□□□□□ -0.38
XRCC3-208ENST00000554811 POLGP54098 1239 aaPredicted RBP12.65□□□□□ -0.38
XRCC3-208ENST00000554811 BAATQ14032 418 aaPredicted RBP12.65□□□□□ -0.38
XRCC3-208ENST00000554811 TKFCQ3LXA3 575 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 MOXD1Q6UVY6 613 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 SV2AQ7L0J3 742 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 ZDHHC14Q8IZN3 488 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.38
XRCC3-208ENST00000554811 NXF1Q9UBU9 619 aaKnown RBP12.65□□□□□ -0.38
XRCC3-208ENST00000554811 R3HDM2Q9Y2K5 976 aaKnown RBP12.65□□□□□ -0.38
XRCC3-208ENST00000554811 ETS1P14921 441 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 DRD4P21917 467 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 NPTX2P47972 431 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 STRN3Q13033 797 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 MTMR2Q13614 643 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 SLMAPQ14BN4 828 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 IZUMO3Q5VZ72 239 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 FUKQ8N0W3 1084 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 SLC17A8Q8NDX2 589 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 FAM167BQ9BTA0 163 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 ECT2Q9H8V3 914 aa12.65□□□□□ -0.38
XRCC3-208ENST00000554811 A0A0A6YYK5 440 aaPredicted RBP12.65□□□□□ -0.39
XRCC3-208ENST00000554811 BANF1O75531 89 aa12.65□□□□□ -0.39
XRCC3-208ENST00000554811 MAP3K6O95382 1288 aa12.65□□□□□ -0.39
XRCC3-208ENST00000554811 ZNF131P52739 623 aa12.65□□□□□ -0.39
XRCC3-208ENST00000554811 DNAJC3Q13217 504 aa12.65□□□□□ -0.39
XRCC3-208ENST00000554811 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.39
XRCC3-208ENST00000554811 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.39
XRCC3-208ENST00000554811 SAE1Q9UBE0 346 aaPredicted RBP12.65□□□□□ -0.39
XRCC3-208ENST00000554811 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.39
XRCC3-208ENST00000554811 PNMA3Q9UL41 463 aa12.65□□□□□ -0.39
XRCC3-208ENST00000554811 F5H423 210 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-208ENST00000554811 KRT1P04264 644 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 KCNJ2P63252 427 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 PPP2R5EQ16537 467 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 ZDHHC24Q6UX98 284 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 TRPM8Q7Z2W7 1104 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 ZKSCAN4Q969J2 545 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-208ENST00000554811 GPR88Q9GZN0 384 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-208ENST00000554811 TELO2Q9Y4R8 837 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 LAMB1P07942 1786 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 PLIN4Q96Q06 1357 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 PFASO15067 1338 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 RPTORQ8N122 1335 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 GTPBP10A4D1E9 387 aaKnown RBP12.64□□□□□ -0.39
XRCC3-208ENST00000554811 A8MUI8 341 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 SUN1O94901 812 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 CIITAP33076 1130 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 PEX19P40855 299 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 FMO1Q01740 532 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 P3H1Q32P28 736 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 SLFN11Q7Z7L1 901 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 USP37Q86T82 979 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 RASGEF1CQ8N431 466 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 IMPG2Q9BZV3 1241 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 WNT8AQ9H1J5 351 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 INTUQ9ULD6 942 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 GINS2Q9Y248 185 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 TLR3O15455 904 aaKnown RBP12.64□□□□□ -0.39
XRCC3-208ENST00000554811 PPFIA2O75334 1257 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 FSBPO95073 299 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 CA4P22748 312 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 PPP2R5CQ13362 524 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 LIN9Q5TKA1 542 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 RFX8Q6ZV50 586 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 DEPTORQ8TB45 409 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 SGSM3Q96HU1 749 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 KLHL14Q9P2G3 628 aa12.64□□□□□ -0.39
XRCC3-208ENST00000554811 PCSK1NQ9UHG2 260 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms