RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TUSC3Q13454 348 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 ATL3Q6DD88 541 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 CYP26C1Q6V0L0 522 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 ASCL5Q7RTU5 278 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 NOSTRINQ8IVI9 506 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 ZBTB8OSQ8IWT0 167 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 GPR65Q8IYL9 337 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 SIX5Q8N196 739 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 FLCNQ8NFG4 579 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 C8orf76Q96K31 380 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 NACC1Q96RE7 527 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 CLSTN3Q9BQT9 956 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 MFSD1Q9H3U5 465 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 PLEKHA4Q9H4M7 779 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHMT2-215ENST00000554656 EPS15L1Q9UBC2 864 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 FBXW11Q9UKB1 542 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 MYH11P35749 1972 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-215ENST00000554656 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
SHMT2-215ENST00000554656 WDR87Q6ZQQ6 2873 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.545e-8■■■■■ 37.4
SHMT2-215ENST00000554656 MIA3Q5JRA6 1907 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 ARHGEF35A5YM69 484 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 NR1I2O75469 434 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 C1RP00736 705 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 LIG1P18858 919 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 AOC1P19801 751 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 GBP2P32456 591 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-215ENST00000554656 NBL1P41271 181 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 NAMPTP43490 491 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 PRPF4BQ13523 1007 aaKnown RBP11.65□□□□□ -0.54
SHMT2-215ENST00000554656 MAPK6Q16659 721 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 TTC38Q5R3I4 469 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 NT5DC1Q5TFE4 455 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 CD300LGQ6UXG3 332 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 ST13P5Q8NFI4 369 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-215ENST00000554656 FBXO18Q8NFZ0 1043 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 PRKD2Q9BZL6 878 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 C2orf40Q9H1Z8 148 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 FOXP1Q9H334 677 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-215ENST00000554656 ZDHHC7Q9NXF8 308 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 IGSF9Q9P2J2 1179 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 FANCMQ8IYD8 2048 aa11.65□□□□□ -0.54
SHMT2-215ENST00000554656 PRR23AA6NEV1 266 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 ANHXE9PGG2 379 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 ACKR2O00590 384 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 TADA2AO75478 443 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 ZMYND10O75800 440 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 THP07101 528 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 CFHP08603 1231 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 TOB1P50616 345 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-215ENST00000554656 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
SHMT2-215ENST00000554656 NTHL1P78549 312 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 RESTQ13127 1097 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-215ENST00000554656 HTR4Q13639 388 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 SAFBQ15424 915 aaKnown RBP eCLIP11.64□□□□□ -0.55
SHMT2-215ENST00000554656 PSMD5Q16401 504 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 FAM171A1Q5VUB5 890 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 GET4Q7L5D6 327 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-215ENST00000554656 BRAPQ7Z569 592 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 DAW1Q8N136 415 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 SLC44A3Q8N4M1 653 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 LNX1Q8TBB1 728 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-215ENST00000554656 TTPALQ9BTX7 342 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 IRF2BPLQ9H1B7 796 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 BHMT2Q9H2M3 363 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 FBXL21Q9UKT6 434 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 GDAQ9Y2T3 454 aa11.64□□□□□ -0.55
SHMT2-215ENST00000554656 PATJQ8NI35 1801 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 PP2D1A8MPX8 630 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 LAMP2P13473 410 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 CCT6AP40227 531 aaKnown RBP11.63□□□□□ -0.55
SHMT2-215ENST00000554656 KRT85P78386 507 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 CREMQ03060 361 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 GLRA4Q5JXX5 417 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 MCTP1Q6DN14 999 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 ELMSAN1Q6PJG2 1045 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 RSPO2Q6UXX9 243 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-215ENST00000554656 TAS1R3Q7RTX0 852 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 FRMD5Q7Z6J6 570 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 CEP57Q86XR8 500 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 CCDC105Q8IYK2 499 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 CEP120Q8N960 986 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 ERMNQ8TAM6 284 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 DEPTORQ8TB45 409 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 STAMQ92783 540 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 PPP1R10Q96QC0 940 aaKnown RBP11.63□□□□□ -0.55
SHMT2-215ENST00000554656 RPP25Q9BUL9 199 aaKnown RBP11.63□□□□□ -0.55
SHMT2-215ENST00000554656 GOLGA2P5Q9HBQ8 144 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 DPP7Q9UHL4 492 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 CA14Q9ULX7 337 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 ZNF292O60281 2723 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 CACNA1IQ9P0X4 2223 aa11.63□□□□□ -0.55
SHMT2-215ENST00000554656 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms