RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 DOCK1Q14185 1865 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PLXNB2O15031 1838 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PHIPQ8WWQ0 1821 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 TRAV20A0A0B4J274 112 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 A0A0U1RQG5 324 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PI4K2BG5E9Z4 385 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 MPHOSPH10O00566 681 aaKnown RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PPP1R12AO14974 1030 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 KCNH1O95259 989 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PGK2P07205 417 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 ASGR1P07306 291 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 GSTM1P09488 218 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 CFPP27918 469 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 CST5P28325 142 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 COPB2P35606 906 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 STAT3P40763 770 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PLCD1P51178 756 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 TMEM132BQ14DG7 1078 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 SF1Q15637 639 aaKnown RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 SLC14A2Q15849 920 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PKN1Q16512 942 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 ZC3H12BQ5HYM0 836 aaKnown RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 FAM209AQ5JX71 171 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 GTF2IRD2BQ6EKJ0 949 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 GALNT18Q6P9A2 607 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 POMZP3Q6PJE2 187 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 TMED8Q6PL24 325 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 KIAA0907Q7Z7F0 614 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 GTF2IRD2Q86UP8 949 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 MIGA1Q8NAN2 632 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 BTN2A2Q8WVV5 523 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 KISS1RQ969F8 398 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 MEIS3Q99687 375 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 SEZ6LQ9BYH1 1024 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 SH2D4AQ9H788 454 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 GPR108Q9NPR9 543 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PIH1D3Q9NQM4 214 aaKnown RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 SMC4Q9NTJ3 1288 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 NOB1Q9ULX3 412 aaKnown RBP5.83□□□□□ -1.48
ATXN3-228ENST00000554592 ADAMTS5Q9UNA0 930 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 SLC4A7Q9Y6M7 1214 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 LOC285556D6RIA3 1793 aa5.83□□□□□ -1.48
ATXN3-228ENST00000554592 ROBO3Q96MS0 1386 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 SYNRGQ9UMZ2 1314 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 ANKRD62A6NC57 917 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 SMIM22K7EJ46 135 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 PRODHO43272 600 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 CABYRO75952 493 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 CLSTN1O94985 981 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 ASMTLO95671 621 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 SNAI1O95863 264 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-228ENST00000554592 CD4P01730 458 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 C6orf222P0C671 652 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-228ENST00000554592 FGFR1P11362 822 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 PABPC1P11940 636 aaKnown RBP5.82□□□□□ -1.48
ATXN3-228ENST00000554592 IFNGR1P15260 489 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 CYP2C18P33260 490 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 RABGGTBP53611 331 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 GJA9P57773 515 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 ERVFRD-1P60508 538 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
ATXN3-228ENST00000554592 GABPAQ06546 454 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 KIAA1755Q5JYT7 1200 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 CWF19L1Q69YN2 538 aaKnown RBP5.82□□□□□ -1.48
ATXN3-228ENST00000554592 MAMDC4Q6UXC1 1216 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 TMEM179Q6ZVK1 233 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 ZNF605Q86T29 641 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 SIAH1Q8IUQ4 282 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 SCUBE1Q8IWY4 988 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 FAM126BQ8IXS8 530 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 KCNN1Q92952 543 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 DHRS4Q9BTZ2 278 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 KRTAP4-9Q9BYQ8 210 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 TMX2Q9Y320 296 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 SF3B6Q9Y3B4 125 aaKnown RBP5.82□□□□□ -1.48
ATXN3-228ENST00000554592 MTCH2Q9Y6C9 303 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 EYSQ5T1H1 3165 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 PTPRFP10586 1907 aa5.82□□□□□ -1.48
ATXN3-228ENST00000554592 DOCK2Q92608 1830 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 CDH23Q9H251 3354 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 CACNA1FO60840 1977 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 TEX51A0A1B0GUA7 166 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 MYADML2A6NDP7 307 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 HRKO00198 91 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 RFXAPO00287 272 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 VWA5AO00534 786 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 WDR46O15213 610 aaKnown RBP5.81□□□□□ -1.48
ATXN3-228ENST00000554592 IDH1O75874 414 aaKnown RBP5.81□□□□□ -1.48
ATXN3-228ENST00000554592 GNAI2P04899 355 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 MSL3P1P0C860 447 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 MYOGP15173 224 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 ATP2A2P16615 1042 aaKnown RBP5.81□□□□□ -1.48
ATXN3-228ENST00000554592 SDHBP21912 280 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 NOP2P46087 812 aaKnown RBP5.81□□□□□ -1.48
ATXN3-228ENST00000554592 GYS2P54840 703 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 NKX3-2P78367 333 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms