RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 TTPALQ9BTX7 342 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 TARS2Q9BW92 718 aaKnown RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 MRPL4Q9BYD3 311 aaKnown RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 KMT5AQ9NQR1 393 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 MAN1C1Q9NR34 630 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 CACNG4Q9UBN1 327 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 CITO14578 2027 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 SF3B1O75533 1304 aaKnown RBP eCLIP12.21□□□□□ -0.45
ABCD4-221ENST00000554453 SMIM28A0A1B0GU29 152 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 VWA3AA6NCI4 1184 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 CASTOR2A6NHX0 329 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 TMEM189-UBE2V1I3L0A0 370 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 TGM5O43548 720 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 BRD1O95696 1058 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 SPATA31D3P0C874 917 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 AVPR2P30518 371 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 GRM5P41594 1212 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 CREMQ03060 361 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 CUL4AQ13619 759 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 FAM171A1Q5VUB5 890 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 CD300LGQ6UXG3 332 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 SPATA31D4Q6ZUB0 917 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 CCDC149Q6ZUS6 474 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 AK8Q96MA6 479 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 PRRX2Q99811 253 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 CLSTN3Q9BQT9 956 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 WDR6Q9NNW5 1121 aaKnown RBP12.21□□□□□ -0.45
ABCD4-221ENST00000554453 KCND2Q9NZV8 630 aa12.21□□□□□ -0.45
ABCD4-221ENST00000554453 ABLIM1O14639 778 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 SLC16A4O15374 487 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 RFPL2O75678 378 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 KIF4AO95239 1232 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 BMP15O95972 392 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 ASGR2P07307 311 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 PLA2G4BP0C869 781 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 MCF2P10911 925 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 PLS3P13797 630 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 PROZP22891 400 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 SMTNP53814 917 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 SLC12A3P55017 1021 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 MTMR3Q13615 1198 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 ZRSR1Q15695 479 aaKnown RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 TMEM119Q4V9L6 283 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 RTP2Q5QGT7 225 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 IER5LQ5T953 404 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 PDXDC1Q6P996 788 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 PRSS55Q6UWB4 352 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 CEP57Q86XR8 500 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 SUGP1Q8IWZ8 645 aaKnown RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 TMEM161BQ8NDZ6 487 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 SMG7Q92540 1137 aaKnown RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 KCNN1Q92952 543 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 ZNF707Q96C28 371 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 ACAP3Q96P50 834 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 PLIN2Q99541 437 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 TCHPQ9BT92 498 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 CCDC94Q9BW85 323 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 CDT1Q9H211 546 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 TOPORSQ9NS56 1045 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-221ENST00000554453 ZDHHC7Q9NXF8 308 aa12.2□□□□□ -0.46
ABCD4-221ENST00000554453 VWA8A3KMH1 1905 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 PLXNA3P51805 1871 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 ZMYND10O75800 440 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 B3GAT3O94766 335 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 MYBP10242 640 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 KCNE1P15382 129 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 FGFR3P22607 806 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 IGFBP6P24592 240 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-221ENST00000554453 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
ABCD4-221ENST00000554453 NHLH1Q02575 133 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 UPP1Q16831 310 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 UVSSAQ2YD98 709 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 ARSHQ5FYA8 562 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-221ENST00000554453 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 CEP120Q8N960 986 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 HASPINQ8TF76 798 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 STAMQ92783 540 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 CDK5RAP3Q96JB5 506 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 ZBTB45Q96K62 511 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-221ENST00000554453 UROC1Q96N76 676 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 IGSF9Q9P2J2 1179 aa12.19□□□□□ -0.46
ABCD4-221ENST00000554453 RIF1Q5UIP0 2472 aaKnown RBP12.18□□□□□ -0.46
ABCD4-221ENST00000554453 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 N4BP1O75113 896 aaKnown RBP12.18□□□□□ -0.46
ABCD4-221ENST00000554453 TOM1L1O75674 476 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 MAPTP10636 758 aaKnown RBP12.18□□□□□ -0.46
ABCD4-221ENST00000554453 UBA7P41226 1012 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 CLCNKBP51801 687 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 NUBP1P53384 320 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 OSTNP61366 133 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 STRN3Q13033 797 aa12.18□□□□□ -0.46
ABCD4-221ENST00000554453 TDGQ13569 410 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms