RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 FILIP1LQ4L180 1135 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 FAM47AQ5JRC9 791 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 TTC19Q6DKK2 380 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ITPRIPL1Q6GPH6 555 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 BNC2Q6ZN30 1099 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 TOGARAM2Q6ZUX3 1019 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC80Q76M96 950 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ZBTB46Q86UZ6 589 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 NRSN1Q8IZ57 195 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 NKAPQ8N5F7 415 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 TMEM57Q8N5G2 664 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 GOLGA6L1Q8N7Z2 621 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 FAM133AQ8N9E0 248 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 UTP15Q8TED0 518 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ATG4CQ96DT6 458 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 RBM14Q96PK6 669 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 CHCHD6Q9BRQ6 235 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 MTIF3Q9H2K0 278 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 GRPEL1Q9HAV7 217 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 BRMS1Q9HCU9 246 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SEPT10Q9P0V9 454 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 IFT80Q9P2H3 777 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ARPP21Q9UBL0 812 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 MCM8Q9UJA3 840 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 BARX2Q9UMQ3 279 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 KIAA1024Q9UPX6 916 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ATP11BQ9Y2G3 1177 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SQORQ9Y6N5 450 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 MICAL3Q7RTP6 2002 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 KMT2EQ8IZD2 1858 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SCN5AQ14524 2016 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ESPNB1AK53 854 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 M0QX08 132 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 M0R3H8 397 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 PEX10O60683 326 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 KPNA6O60684 536 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 DGKIO75912 1065 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 CPP00450 1065 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 MPP1Q00013 466 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ICA1Q05084 483 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 PRKG2Q13237 762 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SP140Q13342 867 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 AAK1Q2M2I8 961 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 GNPTABQ3T906 1256 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 HHATQ5VTY9 493 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 IQSEC1Q6DN90 963 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ZSCAN25Q6NSZ9 544 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC81Q6ZN84 652 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 RAPH1Q70E73 1250 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SPATC1Q76KD6 591 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC186Q7Z3E2 898 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 FAM160B2Q86V87 743 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SLC44A5Q8NCS7 719 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF540Q8NDQ6 660 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 C7orf57Q8NEG2 295 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 KIAA1524Q8TCG1 905 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 EPS8L3Q8TE67 593 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 GJA10Q969M2 543 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 PPP1R9BQ96SB3 815 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SLC9A7Q96T83 725 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 C7orf25Q9BPX7 421 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SLF1Q9BQI6 1058 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 MAK16Q9BXY0 300 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 PBX4Q9BYU1 374 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 LRRCC1Q9C099 1032 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 TNMDQ9H2S6 317 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ELAC1Q9H777 363 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ATP6V0A4Q9HBG4 840 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 VTA1Q9NP79 307 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ANLNQ9NQW6 1124 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 TLR7Q9NYK1 1049 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 PDP2Q9P2J9 529 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 SAP30BPQ9UHR5 308 aaKnown RBP2.96□□□□□ -1.94
PRPF39-206ENST00000554429 TTLL3Q9Y4R7 772 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 ZMYM6O95789 1325 aa2.96□□□□□ -1.94
PRPF39-206ENST00000554429 PNMA6FA0A0J9YX94 578 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ABHD14A-ACY1A0A1B0GW23 586 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ASB14A6NK59 587 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 SOBPA7XYQ1 873 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 PI4K2BG5E9Z4 385 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 KIF2AO00139 706 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NKRFO15226 690 aaKnown RBP eCLIP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NCAM2O15394 837 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ZBTB43O43298 467 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 ZEB2O60315 1214 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 APBB3O95704 486 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 POLR3DP05423 398 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 PCP11498 1178 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 RAG1P15918 1043 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 MPSTP25325 297 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 DDIT3P35638 169 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 NOP2P46087 812 aaKnown RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 DGKGP49619 791 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 CCNHP51946 323 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 RAC1P63000 192 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 PLCB3Q01970 1234 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 GHRHRQ02643 423 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 IFRD2Q12894 506 aaPredicted RBP2.95□□□□□ -1.94
PRPF39-206ENST00000554429 STRN3Q13033 797 aa2.95□□□□□ -1.94
PRPF39-206ENST00000554429 TRDNQ13061 729 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms