RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 HOXB8P17481 243 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-211ENST00000554310 MCL1Q07820 350 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 PKP1Q13835 747 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 XKR4Q5GH76 650 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 ANKRD54Q6NXT1 300 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 SV2BQ7L1I2 683 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 ZBTB33Q86T24 672 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 ADHFE1Q8IWW8 467 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 GPR65Q8IYL9 337 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 UROC1Q96N76 676 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 ACAP3Q96P50 834 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 PPP1R10Q96QC0 940 aaKnown RBP14.29□□□□□ -0.12
SHMT2-211ENST00000554310 FIZ1Q96SL8 496 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 ST6GALNAC4Q9H4F1 302 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 SLC38A7Q9NVC3 462 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 DZANK1Q9NVP4 752 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
SHMT2-211ENST00000554310 SEL1LQ9UBV2 794 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 CFAP45Q9UL16 551 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 TBX20Q9UMR3 447 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 USP15Q9Y4E8 981 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-211ENST00000554310 CASTOR2A6NHX0 329 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 F8W810 466 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 GOLGA6L22H0YM25 854 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 CUTAO60888 179 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 LILRB3O75022 631 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 KIF4AO95239 1232 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 HARSP12081 509 aaKnown RBP14.28□□□□□ -0.12
SHMT2-211ENST00000554310 GAP43P17677 238 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 LIG4P49917 911 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 OSTNP61366 133 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 DSG1Q02413 1049 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 CREMQ03060 361 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 ZP2Q05996 745 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 KYAT1Q16773 422 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 SKOR2Q2VWA4 1001 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-211ENST00000554310 USP41Q3LFD5 358 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 TPRNQ4KMQ1 711 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 GLRA4Q5JXX5 417 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 KIAA1841Q6NSI8 718 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 MAP4K3Q8IVH8 894 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 GJD3Q8N144 294 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 DDX12PQ92771 950 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 CXCL16Q9H2A7 254 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 CNTN3Q9P232 1028 aa14.28□□□□□ -0.12
SHMT2-211ENST00000554310 A0A087X0B3 334 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 MYMKA6NI61 221 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 TMEM189-UBE2V1I3L0A0 370 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 TADA2AO75478 443 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 ADH1AP07327 375 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 CNPP09543 421 aaKnown RBP14.27□□□□□ -0.13
SHMT2-211ENST00000554310 KCNE1P15382 129 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 SSTR3P32745 418 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-211ENST00000554310 MATR3P43243 847 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHMT2-211ENST00000554310 GTF2BQ00403 316 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 ELAVL2Q12926 359 aaKnown RBP14.27□□□□□ -0.13
SHMT2-211ENST00000554310 SYCE2Q6PIF2 218 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 DYMQ7RTS9 669 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 SFR1Q86XK3 245 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 PDILTQ8N807 584 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 SLC22A17Q8WUG5 538 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 SUSD6Q92537 303 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 HVCN1Q96D96 273 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 DNAJC19Q96DA6 116 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 ZBTB45Q96K62 511 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-211ENST00000554310 KLHL5Q96PQ7 755 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 PAAF1Q9BRP4 392 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 RXFP1Q9HBX9 757 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHMT2-211ENST00000554310 CHST7Q9NS84 486 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 ZDHHC9Q9Y397 364 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-211ENST00000554310 PLXNA3P51805 1871 aa14.27□□□□□ -0.13
SHMT2-211ENST00000554310 VWA8A3KMH1 1905 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 C19orf67A6NJJ6 358 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 C2CD2LO14523 706 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 CLTAP09496 248 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 KLRC2P26717 231 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 NMT1P30419 496 aaKnown RBP14.26□□□□□ -0.13
SHMT2-211ENST00000554310 ME1P48163 572 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 CLCN4P51793 760 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 ITIH3Q06033 890 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 E2F4Q16254 413 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 FOXD4L6Q3SYB3 417 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-211ENST00000554310 AXDND1Q5T1B0 1012 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-211ENST00000554310 KIAA0319Q5VV43 1072 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 FOXD4L3Q6VB84 417 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-211ENST00000554310 RABGGTAQ92696 567 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 GPR62Q9BZJ7 368 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 LRRC27Q9C0I9 530 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 S1PR5Q9H228 398 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 OLFML3Q9NRN5 406 aa14.26□□□□□ -0.13
SHMT2-211ENST00000554310 CACNG4Q9UBN1 327 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms