RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 HSP90AA2PQ14568 343 aaPredicted RBP12.81□□□□□ -0.36
TUBB3-204ENST00000554116 PIK3R5Q8WYR1 880 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 BSNDQ8WZ55 320 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 WASF1Q92558 559 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 FGF13Q92913 245 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 GTF3C6Q969F1 213 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 FZD8Q9H461 694 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 PIDD1Q9HB75 910 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 HCFC1R1Q9NWW0 138 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
TUBB3-204ENST00000554116 CDH7Q9ULB5 785 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 USP24Q9UPU5 2620 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 ZZEF1O43149 2961 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 CASTOR2A6NHX0 329 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 NRG2O14511 850 aaPredicted RBP12.8□□□□□ -0.36
TUBB3-204ENST00000554116 DGAT1O75907 488 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 CD72P21854 359 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 SDHBP21912 280 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 TUSC3Q13454 348 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
TUBB3-204ENST00000554116 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
TUBB3-204ENST00000554116 ELMSAN1Q6PJG2 1045 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 CNTNAP3Q9BZ76 1288 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 POLR3FQ9H1D9 316 aaPredicted RBP12.8□□□□□ -0.36
TUBB3-204ENST00000554116 TMEM60Q9H2L4 133 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 PDZD7Q9H5P4 517 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 PARP2Q9UGN5 583 aa12.8□□□□□ -0.36
TUBB3-204ENST00000554116 MAP1BP46821 2468 aaKnown RBP12.8□□□□□ -0.36
TUBB3-204ENST00000554116 CCL16O15467 120 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 TADA2AO75478 443 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 KRT37O76014 449 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 TFDP1Q14186 410 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 FAM187BQ17R55 369 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 FAM171A1Q5VUB5 890 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 EEF1DP3Q658K8 133 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 ZNF687Q8N1G0 1237 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 NELL1Q92832 810 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 TTPALQ9BTX7 342 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 PLA2G2FQ9BZM2 168 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 TRIM6Q9C030 488 aaPredicted RBP12.79□□□□□ -0.36
TUBB3-204ENST00000554116 CCDC113Q9H0I3 377 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 TTC12Q9H892 705 aaPredicted RBP12.79□□□□□ -0.36
TUBB3-204ENST00000554116 SNTG2Q9NY99 539 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 DNMT3BQ9UBC3 853 aaKnown RBP12.79□□□□□ -0.36
TUBB3-204ENST00000554116 PCDHA12Q9UN75 941 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 LIMCH1Q9UPQ0 1083 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
TUBB3-204ENST00000554116 COL4A2P08572 1712 aa12.79□□□□□ -0.36
TUBB3-204ENST00000554116 KANSL1LA0AUZ9 987 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 USO1O60763 962 aaKnown RBP12.78□□□□□ -0.36
TUBB3-204ENST00000554116 KINO60870 393 aaKnown RBP12.78□□□□□ -0.36
TUBB3-204ENST00000554116 MED24O75448 989 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 NR1I2O75469 434 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 RECQL4O94761 1208 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 C8AP07357 584 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 HNRNPA1P09651 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
TUBB3-204ENST00000554116 TGM1P22735 817 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 HOXA9P31269 272 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 RAB33AQ14088 237 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 PSMD5Q16401 504 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 SLC5A9Q2M3M2 681 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 SLC44A4Q53GD3 710 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 NPAS3Q8IXF0 933 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 C3orf58Q8NDZ4 430 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 NSUN7Q8NE18 718 aaKnown RBP12.78□□□□□ -0.36
TUBB3-204ENST00000554116 BORCS6Q96GS4 357 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 CEP295Q9C0D2 2601 aa12.78□□□□□ -0.36
TUBB3-204ENST00000554116 SF3B1O75533 1304 aaKnown RBP eCLIP12.78□□□□□ -0.36
TUBB3-204ENST00000554116 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.36
TUBB3-204ENST00000554116 BTBD18B2RXH4 712 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 JAK2O60674 1132 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 POU2F2P09086 479 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 XRCC6P12956 609 aaKnown RBP eCLIP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 FGFR3P22607 806 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 OR1D2P34982 312 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 TXKP42681 527 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 NCBP1Q09161 790 aaKnown RBP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 MLF2Q15773 248 aaPredicted RBP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 RSPO4Q2I0M5 234 aaPredicted RBP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 AXDND1Q5T1B0 1012 aaPredicted RBP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 CATSPER3Q86XQ3 398 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 CEP57Q86XR8 500 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 NOSTRINQ8IVI9 506 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 SLC7A14Q8TBB6 771 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 CLDN23Q96B33 292 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 KIF2CQ99661 725 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.37
TUBB3-204ENST00000554116 KXD1Q9BQD3 176 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 POLD4Q9HCU8 107 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 CACNA1GO43497 2377 aa12.77□□□□□ -0.37
TUBB3-204ENST00000554116 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 FAM170BA6NMN3 283 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms