RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 AGAP1Q9UPQ3 857 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 COL2A1P02458 1487 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 NRXN2Q9P2S2 1712 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ANKRD36CQ5JPF3 1778 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PIEZO2Q9H5I5 2752 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 NRP1O14786 923 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 EFCAB14O75071 495 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PRPF40AO75400 957 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 STAM2O75886 525 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ADH1AP07327 375 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 C8AP07357 584 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 GRIK1P39086 918 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SSR1P43307 286 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ALDH1A3P47895 512 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CDK7P50613 346 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PSMC1P62191 440 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SMAD3P84022 425 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ADCY1Q08828 1119 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 DUSP4Q13115 394 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PKP1Q13835 747 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 MYBPC2Q14324 1141 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PPP2R5AQ15172 486 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 TCTN1Q2MV58 587 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC40Q4G0X9 1142 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 TIGD5Q53EQ6 642 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 C2orf27AQ580R0 203 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 APBB1IPQ7Z5R6 666 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 METTL23Q86XA0 190 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SMYD4Q8IYR2 804 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 RGL4Q8IZJ4 473 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 LRRC43Q8N309 656 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SDR16C5Q8N3Y7 309 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 NAT16Q8N8M0 369 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 FSIP1Q8NA03 581 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 MCPH1Q8NEM0 835 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 MORC4Q8TE76 937 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SNX19Q92543 992 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 FAM20AQ96MK3 541 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 GCNAQ96QF7 691 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PCYT2Q99447 389 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PI4K2AQ9BTU6 479 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 IMPG2Q9BZV3 1241 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CSRNP2Q9H175 543 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SYNDIG1Q9H7V2 258 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 MAN1C1Q9NR34 630 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 EXOC1Q9NV70 894 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PLK2Q9NYY3 685 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CD207Q9UJ71 328 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 RAB23Q9ULC3 237 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 USP15Q9Y4E8 981 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 IPPQ9Y573 584 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 MTCH2Q9Y6C9 303 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 R4GN57 208 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ADGRA3Q8IWK6 1321 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CITO14578 2027 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 EVPLQ92817 2033 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 MYO18AQ92614 2054 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 MYO9AB2RTY4 2548 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 K7ELQ4 463 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TNFRSF10AO00220 468 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CLGNO14967 610 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SPTLC2O15270 562 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CTAGE5O15320 804 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 HOXA2O43364 376 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TRAPPC3O43617 180 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KINO60870 393 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 OFD1O75665 1012 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SLITRK3O94933 977 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CD4P01730 458 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PFKMP08237 780 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CNPP09543 421 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TNNT1P13805 278 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 FDPSP14324 419 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 LAG3P18627 525 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 AVPR1AP37288 418 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SLC11A1P49279 550 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RARRES1P49788 294 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CLCNKBP51801 687 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ATXN3P54252 364 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PLD1Q13393 1074 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MXD4Q14582 209 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PSMD5Q16401 504 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 WDR72Q3MJ13 1102 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RILPL1Q5EBL4 403 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 PDZD4Q76G19 769 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 TAS1R1Q7RTX1 841 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 HAUS6Q7Z4H7 955 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RTN4RL1Q86UN2 441 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SFR1Q86XK3 245 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ECHDC2Q86YB7 292 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MIB1Q86YT6 1006 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CSGALNACT2Q8N6G5 542 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MAB21L3Q8N8X9 362 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 KREMEN2Q8NCW0 462 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 FAM149B1Q96BN6 582 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF653Q96CK0 615 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 USP28Q96RU2 1077 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RIT2Q99578 217 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 CRACR2AQ9BSW2 395 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MTA3Q9BTC8 594 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms