RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CYP26B1Q9NR63 512 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 DBR1Q9UK59 544 aaKnown RBP8.24□□□□□ -1.09
ATXN3-219ENST00000553488 RBM8AQ9Y5S9 174 aaKnown RBP8.24□□□□□ -1.09
ATXN3-219ENST00000553488 CHD6Q8TD26 2715 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 ARID2Q68CP9 1835 aa8.24□□□□□ -1.09
ATXN3-219ENST00000553488 CCDC69A6NI79 296 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 NT5C1B-RDH14C9J2C7 533 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 B4GALT3O60512 393 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 PRMT3O60678 531 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 N4BP1O75113 896 aaKnown RBP8.23□□□□□ -1.09
ATXN3-219ENST00000553488 FOSP01100 380 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-219ENST00000553488 CTSAP10619 480 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 DARSP14868 501 aaKnown RBP8.23□□□□□ -1.09
ATXN3-219ENST00000553488 EIF4BP23588 611 aaKnown RBP8.23□□□□□ -1.09
ATXN3-219ENST00000553488 MCM5P33992 734 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 GPC3P51654 580 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 ADCY7P51828 1080 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 POLGP54098 1239 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-219ENST00000553488 NAPAP54920 295 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 NLRP11P59045 1033 aaKnown RBP8.23□□□□□ -1.09
ATXN3-219ENST00000553488 PTPN14Q15678 1187 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 ATAT1Q5SQI0 421 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 SWSAP1Q6NVH7 229 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 MIS18BP1Q6P0N0 1132 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 TMC5Q6UXY8 1006 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 NFXL1Q6ZNB6 911 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 GPR149Q86SP6 731 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 MICU3Q86XE3 530 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 VPS52Q8N1B4 723 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 LRRC71Q8N4P6 559 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 METTL13Q8N6R0 699 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 FANCBQ8NB91 859 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 DTWD2Q8NBA8 298 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 FLCNQ8NFG4 579 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 RUFY2Q8WXA3 655 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 TMEM169Q96HH4 297 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 SFXN1Q9H9B4 322 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 KLK14Q9P0G3 267 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 COL4A3Q01955 1670 aa8.23□□□□□ -1.09
ATXN3-219ENST00000553488 hCG_1984214I3L0E3 225 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 IPO5O00410 1097 aaKnown RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 ADAMTS3O15072 1205 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 NARSO43776 548 aaKnown RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 ZNF862O60290 1169 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 ZC3H11AO75152 810 aaKnown RBP eCLIP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 CXCL14O95715 111 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 CYP3A4P08684 503 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 ZSCAN20P17040 1043 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 FGFR4P22455 802 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 TDGQ13569 410 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 C11orf91Q3C1V1 193 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 COX20Q5RI15 118 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 CCDC149Q6ZUS6 474 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 CHSY3Q70JA7 882 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 DDX53Q86TM3 631 aaKnown RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 PLA2G4DQ86XP0 818 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 SMAP1Q8IYB5 467 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 TMTC2Q8N394 836 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 ZNF713Q8N859 430 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 RNF169Q8NCN4 708 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 LENG9Q96B70 501 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 IGSF21Q96ID5 467 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 ZNF668Q96K58 619 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 MAP7D2Q96T17 732 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 RTP3Q9BQQ7 232 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 LRRC2Q9BYS8 371 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 LSG1Q9H089 658 aaKnown RBP8.22□□□□□ -1.09
ATXN3-219ENST00000553488 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 TBC1D13Q9NVG8 400 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 BARHL2Q9NY43 387 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 CEP131Q9UPN4 1083 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 AKT3Q9Y243 479 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 SLC12A7Q9Y666 1083 aa8.22□□□□□ -1.09
ATXN3-219ENST00000553488 NOTCH4Q99466 2003 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 ELOA3CA0A087WX78 387 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-219ENST00000553488 KRBA1A5PL33 1030 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 ELOA3DA6NLF2 546 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-219ENST00000553488 MEIS3P2A8K0S8 358 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 MAGEB2O15479 319 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 GALTP07902 379 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 CA8P35219 290 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 SLC11A1P49279 550 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 ALDH7A1P49419 539 aaKnown RBP8.21□□□□□ -1.1
ATXN3-219ENST00000553488 CLCN4P51793 760 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 SETQ01105 290 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-219ENST00000553488 DRP2Q13474 957 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 GIT2Q14161 759 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 UGCGQ16739 394 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 ELOA3BQ3SY89 546 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 EFCAB12Q6NXP0 572 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 APOA5Q6Q788 366 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 C15orf39Q6ZRI6 1047 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 OTOP3Q7RTS5 596 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 CABP7Q86V35 215 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 CKAP2LQ8IYA6 745 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 ELOA3Q8NG57 546 aa8.21□□□□□ -1.1
ATXN3-219ENST00000553488 RSPH1Q8WYR4 309 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms