RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 PIK3R5Q8WYR1 880 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 UROC1Q96N76 676 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 PAAF1Q9BRP4 392 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 TCHPQ9BT92 498 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
LINC00643-202ENST00000553426 MRPL4Q9BYD3 311 aaKnown RBP14.01□□□□□ -0.17
LINC00643-202ENST00000553426 PRKD2Q9BZL6 878 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 NT5C3AQ9H0P0 336 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 TMEM134Q9H6X4 195 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 KCNK12Q9HB15 430 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 KMT5AQ9NQR1 393 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.01□□□□□ -0.17
LINC00643-202ENST00000553426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00643-202ENST00000553426 FBXL21Q9UKT6 434 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 USP20Q9Y2K6 914 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 MYO10Q9HD67 2058 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 PP2D1A8MPX8 630 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 HIP1RO75146 1068 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 PDGFBP01127 241 aaPredicted RBP14□□□□□ -0.17
LINC00643-202ENST00000553426 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
LINC00643-202ENST00000553426 SMTNP53814 917 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 STRN3Q13033 797 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 ZNF568Q3ZCX4 644 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 RTP2Q5QGT7 225 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 RINT1Q6NUQ1 792 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 DCLRE1AQ6PJP8 1040 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 NXPE3Q969Y0 559 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 TMX3Q96JJ7 454 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 SLC38A7Q9NVC3 462 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 CACNG4Q9UBN1 327 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 CFAP54Q96N23 3096 aa14□□□□□ -0.17
LINC00643-202ENST00000553426 ZMYND10O75800 440 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 B3GAT3O94766 335 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 EDN1P05305 212 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 HNRNPA1P09651 372 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 GJB2P29033 226 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 CDC25AP30304 524 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 GLRA4Q5JXX5 417 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 LILRA6Q6PI73 481 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 LNX1Q8TBB1 728 aaPredicted RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 ATOH1Q92858 354 aaPredicted RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 ZNF707Q96C28 371 aaPredicted RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 DDX27Q96GQ7 796 aaKnown RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 ACO2Q99798 780 aaKnown RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 RUSC1Q9BVN2 902 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 SMOC2Q9H3U7 446 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 DUSP12Q9UNI6 340 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 SMC3Q9UQE7 1217 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.99□□□□□ -0.17
LINC00643-202ENST00000553426 KMT2EQ8IZD2 1858 aa13.99□□□□□ -0.17
LINC00643-202ENST00000553426 VWA3AA6NCI4 1184 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 TMEM189-UBE2V1I3L0A0 370 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 XYLBO75191 536 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 PAPLNO95428 1278 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 RFX1P22670 979 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 GUCY2CP25092 1073 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 GRM5P41594 1212 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 CLCN5P51795 746 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 OSTNP61366 133 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 TCF15Q12870 199 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 NAB2Q15742 525 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 IL17AQ16552 155 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 PPM1LQ5SGD2 360 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
LINC00643-202ENST00000553426 C1orf186Q6ZWK4 172 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 GET4Q7L5D6 327 aaPredicted RBP13.98□□□□□ -0.17
LINC00643-202ENST00000553426 FEZF2Q8TBJ5 459 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 ACAP3Q96P50 834 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 PPP1R10Q96QC0 940 aaKnown RBP13.98□□□□□ -0.17
LINC00643-202ENST00000553426 CLSTN3Q9BQT9 956 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 TARS2Q9BW92 718 aaKnown RBP13.98□□□□□ -0.17
LINC00643-202ENST00000553426 KCND2Q9NZV8 630 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 ARHGAP28Q9P2N2 729 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 EPS15L1Q9UBC2 864 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 FBXW11Q9UKB1 542 aa13.98□□□□□ -0.17
LINC00643-202ENST00000553426 ZFP37Q9Y6Q3 630 aaPredicted RBP13.98□□□□□ -0.17
LINC00643-202ENST00000553426 DENND4AQ7Z401 1863 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 SMIM28A0A1B0GU29 152 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 SFI1A8K8P3 1242 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 H0YCG3 227 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 SLC16A4O15374 487 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
LINC00643-202ENST00000553426 C8AP07357 584 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 MCF2P10911 925 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 CLCNKBP51801 687 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 RAD51AP2Q09MP3 1159 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 UPP1Q16831 310 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 UVSSAQ2YD98 709 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 LARP1BQ659C4 914 aaKnown RBP13.97□□□□□ -0.17
LINC00643-202ENST00000553426 MPZL3Q6UWV2 235 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 ANKS3Q6ZW76 656 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 RTL10Q7L3V2 364 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 FLCNQ8NFG4 579 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 SPIRE2Q8WWL2 714 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 AK8Q96MA6 479 aa13.97□□□□□ -0.17
LINC00643-202ENST00000553426 NTPCRQ9BSD7 190 aaKnown RBP13.97□□□□□ -0.17
LINC00643-202ENST00000553426 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms