RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PDXDC1Q6P996 788 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 GET4Q7L5D6 327 aaPredicted RBP13.08□□□□□ -0.32
CKAP4-202ENST00000552828 GLYCTKQ8IVS8 523 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 DIS3L2Q8IYB7 885 aaKnown RBP13.08□□□□□ -0.32
CKAP4-202ENST00000552828 FBXO18Q8NFZ0 1043 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 NACC1Q96RE7 527 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 POLR3CQ9BUI4 534 aaPredicted RBP13.08□□□□□ -0.32
CKAP4-202ENST00000552828 CCDC113Q9H0I3 377 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 C2orf40Q9H1Z8 148 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 CDH7Q9ULB5 785 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 SMC3Q9UQE7 1217 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 SIT1Q9Y3P8 196 aa13.08□□□□□ -0.32
CKAP4-202ENST00000552828 POTEMA6NI47 508 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 ACKR2O00590 384 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 N4BP3O15049 544 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 MED24O75448 989 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 LMNAP02545 664 aaKnown RBP13.07□□□□□ -0.32
CKAP4-202ENST00000552828 ATP2B1P20020 1258 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 ELAVL2Q12926 359 aaKnown RBP13.07□□□□□ -0.32
CKAP4-202ENST00000552828 PSMD5Q16401 504 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 UVSSAQ2YD98 709 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 DCLRE1AQ6PJP8 1040 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 RTL10Q7L3V2 364 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 GRASPQ7Z6J2 395 aaPredicted RBP13.07□□□□□ -0.32
CKAP4-202ENST00000552828 ZBTB8OSQ8IWT0 167 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 FGF14Q92915 247 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 RPP25Q9BUL9 199 aaKnown RBP13.07□□□□□ -0.32
CKAP4-202ENST00000552828 CXCL16Q9H2A7 254 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 TMEM60Q9H2L4 133 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
CKAP4-202ENST00000552828 DOCK8Q8NF50 2099 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 TMEM189-UBE2V1I3L0A0 370 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 ADAM12O43184 909 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 RECQL4O94761 1208 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 DCNP07585 359 aaKnown RBP13.06□□□□□ -0.32
CKAP4-202ENST00000552828 GLULP15104 373 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 CYP11B2P19099 503 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 FGFR3P22607 806 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 RFX1P22670 979 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 RPA1P27694 616 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 GJB2P29033 226 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 ID4P47928 161 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 GPC5P78333 572 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 PRPF4BQ13523 1007 aaKnown RBP13.06□□□□□ -0.32
CKAP4-202ENST00000552828 CUL4AQ13619 759 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 GNL2Q13823 731 aaKnown RBP13.06□□□□□ -0.32
CKAP4-202ENST00000552828 RAB33AQ14088 237 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 MAPK6Q16659 721 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 LIN9Q5TKA1 542 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
CKAP4-202ENST00000552828 MAEAQ7L5Y9 396 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 C1orf210Q8IVY1 113 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 PJA1Q8NG27 643 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 FGF13Q92913 245 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 SNX21Q969T3 373 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 SHDQ96IW2 340 aa13.06□□□□□ -0.32
CKAP4-202ENST00000552828 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
CKAP4-202ENST00000552828 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
CKAP4-202ENST00000552828 XYLBO75191 536 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 EDN1P05305 212 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 PRKCBP05771 671 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 C8AP07357 584 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 SP9P0CG40 484 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 MUTP22033 750 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 NAMPTP43490 491 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 NTHL1P78549 312 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 ORC2Q13416 577 aaPredicted RBP13.05□□□□□ -0.32
CKAP4-202ENST00000552828 PPM1LQ5SGD2 360 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 NOSTRINQ8IVI9 506 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 HASPINQ8TF76 798 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 ADPGKQ9BRR6 497 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
CKAP4-202ENST00000552828 KCNH3Q9ULD8 1083 aa13.05□□□□□ -0.32
CKAP4-202ENST00000552828 TDRD15B5MCY1 1934 aaKnown RBP13.04□□□□□ -0.32
CKAP4-202ENST00000552828 MTCL1Q9Y4B5 1905 aaKnown RBP13.04□□□□□ -0.32
CKAP4-202ENST00000552828 MCM7P33993 719 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 OR1D2P34982 312 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 EFNA5P52803 228 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 PPP2R5AQ15172 486 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 DCAF4L1Q3SXM0 396 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 AXDND1Q5T1B0 1012 aaPredicted RBP13.04□□□□□ -0.32
CKAP4-202ENST00000552828 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
CKAP4-202ENST00000552828 CD300LGQ6UXG3 332 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 HSCBQ8IWL3 235 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 MAML2Q8IZL2 1156 aaPredicted RBP13.04□□□□□ -0.32
CKAP4-202ENST00000552828 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 BORCS6Q96GS4 357 aa13.04□□□□□ -0.32
CKAP4-202ENST00000552828 INTS4Q96HW7 963 aaKnown RBP13.04□□□□□ -0.32
CKAP4-202ENST00000552828 PPP1R10Q96QC0 940 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms