RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 RECQL4O94761 1208 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 EOMESO95936 686 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 SERPINC1P01008 464 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PFKMP08237 780 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ACRP10323 421 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ITGA4P13612 1032 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 KRT13P13646 458 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PRKCSHP14314 528 aaPredicted RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 SYN1P17600 705 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 AKAP5P24588 427 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 RAB27AP51159 221 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 COPB1P53618 953 aaKnown RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 YARSP54577 528 aaKnown RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 UBASH3AP57075 661 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 DLG4P78352 724 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 CLDN10P78369 228 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 FANCCQ00597 558 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PLCB2Q00722 1185 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ENPEPQ07075 957 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 KCNH2Q12809 1159 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PPIGQ13427 754 aaKnown RBP eCLIP4.61□□□□□ -1.674e-12■□□□□ 8.9
ERBB3-220ENST00000552691 IKBKEQ14164 716 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PSMD6Q15008 389 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 SURF1Q15526 300 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 MAN2A1Q16706 1144 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 XKR4Q5GH76 650 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 DCAF17Q5H9S7 520 aaPredicted RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 MIIPQ5JXC2 388 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 C1orf220Q5T0J3 134 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 TCERG1LQ5VWI1 586 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ALKAL1Q6UXT8 129 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 AGMOQ6ZNB7 445 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 C16orf59Q7L2K0 433 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ZNF598Q86UK7 904 aaKnown RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 BRSK2Q8IWQ3 736 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 CD302Q8IX05 232 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 HACE1Q8IYU2 909 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ANKRD20A12PQ8NF67 263 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 TMC2Q8TDI7 906 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ZNF516Q92618 1163 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 LPPQ93052 612 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 SLC35C1Q96A29 364 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 CCDC127Q96BQ5 260 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PGBD4Q96DM1 585 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 FAM212AQ96EL1 285 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 SNX27Q96L92 541 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 NAP1L5Q96NT1 182 aaPredicted RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 FNBP1Q96RU3 617 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 POP1Q99575 1024 aaKnown RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 APOL6Q9BWW8 343 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 VPS16Q9H269 839 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 CXCL16Q9H2A7 254 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 RNF39Q9H2S5 420 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 NDST4Q9H3R1 872 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ASB7Q9H672 318 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ELAC1Q9H777 363 aaKnown RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PLEKHA5Q9HAU0 1116 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 GRPEL1Q9HAV7 217 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PDE11AQ9HCR9 933 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 IL23AQ9NPF7 189 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 TOPORSQ9NS56 1045 aaPredicted RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 C1orf112Q9NSG2 853 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 TAB2Q9NYJ8 693 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 KLK14Q9P0G3 267 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PARP2Q9UGN5 583 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 ZMYND8Q9ULU4 1186 aaPredicted RBP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 GIT1Q9Y2X7 761 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 PCDHB7Q9Y5E2 793 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.61□□□□□ -1.67
ERBB3-220ENST00000552691 GREB1Q4ZG55 1949 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 COL4A6Q14031 1691 aa4.61□□□□□ -1.67
ERBB3-220ENST00000552691 DENND4CQ5VZ89 1909 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 A0A1B0GTH6 734 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 SMIM28A0A1B0GU29 152 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 PES1O00541 588 aaKnown RBP4.6□□□□□ -1.67
ERBB3-220ENST00000552691 PTGESO14684 152 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 TEX33O43247 280 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 OFD1O75665 1012 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 IL18RAPO95256 599 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 FGBP02675 491 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 AFPP02771 609 aaKnown RBP4.6□□□□□ -1.67
ERBB3-220ENST00000552691 C4BPAP04003 597 aaKnown RBP4.6□□□□□ -1.67
ERBB3-220ENST00000552691 TPM2P07951 284 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 NFICP08651 508 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 TRIM49P0CI25 452 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 TRIM49CP0CI26 452 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 DLATP10515 647 aaKnown RBP4.6□□□□□ -1.67
ERBB3-220ENST00000552691 KCNE1P15382 129 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 TNNI1P19237 187 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 IBSPP21815 317 aaPredicted RBP4.6□□□□□ -1.67
ERBB3-220ENST00000552691 GTF2H1P32780 548 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 FMO5P49326 533 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 MRE11P49959 708 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 AFF1P51825 1210 aaKnown RBP4.6□□□□□ -1.67
ERBB3-220ENST00000552691 EPHB4P54760 987 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 FPGSQ05932 587 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 PPP2R3AQ06190 1150 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 PPP3CAQ08209 521 aa4.6□□□□□ -1.67
ERBB3-220ENST00000552691 NR1I3Q14994 352 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms