RNA–Protein interactions for RNA: ENST00000552623.5

CALCOCO1-221, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-221ENST00000552623 TMOD1P28289 359 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 GDI1P31150 447 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 MPLP40238 635 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 MAGEA9P43362 315 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 RBM25P49756 843 aaKnown RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 CCR3P51677 355 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 LIMK1P53667 647 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 SETQ01105 290 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 PTGDRQ13258 359 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 AP3B2Q13367 1082 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 HDAC1Q13547 482 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 SART3Q15020 963 aaKnown RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 NAB2Q15742 525 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 GLRA4Q5JXX5 417 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 PRSS36Q5K4E3 855 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 PLA2G2CQ5R387 149 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 PPM1LQ5SGD2 360 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 PPP1R18Q6NYC8 613 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 LRSAM1Q6UWE0 723 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 B3GNT9Q6UX72 402 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 CYP26C1Q6V0L0 522 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 ZNF852Q6ZMS4 543 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 CEP68Q76N32 757 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 ZNF410Q86VK4 478 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 CHD1LQ86WJ1 897 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 CEP57Q86XR8 500 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 SMAP1Q8IYB5 467 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 CELF5Q8N6W0 485 aaKnown RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 RIN3Q8TB24 985 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 ASAP3Q8TDY4 903 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 PIK3R5Q8WYR1 880 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 FAM3CQ92520 227 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 TNPO1Q92973 898 aaKnown RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 DDX27Q96GQ7 796 aaKnown RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 LRRC3BQ96PB8 259 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 FAM193BQ96PV7 902 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 MAP3K14Q99558 947 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 OSBPL3Q9H4L5 887 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 BRD9Q9H8M2 597 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 LMAN1LQ9HAT1 526 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 BARHL2Q9NY43 387 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 MRPS23Q9Y3D9 190 aaKnown RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 COL4A3BPQ9Y5P4 624 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 COL12A1Q99715 3063 aa4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 MUC22E2RYF6 1773 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO1-221ENST00000552623 CITO14578 2027 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 PTPRBP23467 1997 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SF3B1O75533 1304 aaKnown RBP eCLIP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 WDR27A2RRH5 827 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 C4orf47A7E2U8 309 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SLC27A2O14975 620 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SGSM2O43147 1006 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SLC37A4O43826 429 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 GAS7O60861 476 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 MAFO75444 373 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 ECI2O75521 394 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 PSMD10O75832 226 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SEC24AO95486 1093 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 PRAMEF12O95522 483 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 ALDH2P05091 517 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 CYP3A4P08684 503 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SRGAP2CP0DJJ0 459 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 CPA1P15085 419 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 ARF4P18085 180 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 U2AF2P26368 475 aaKnown RBP eCLIP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 CHMLP26374 656 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SMARCA1P28370 1054 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 TKTP29401 623 aaKnown RBP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 HOXA9P31269 272 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 OR1D2P34982 312 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 BRCC3P46736 316 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 CXCL12P48061 93 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 CDR1P51861 262 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 PFKPQ01813 784 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 MBTD1Q05BQ5 628 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 TNK2Q07912 1038 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 LAMTOR4Q0VGL1 99 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 CAPSQ13938 189 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 HSP90AA2PQ14568 343 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 EMC2Q15006 297 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 RTN1Q16799 776 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 USP41Q3LFD5 358 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 AXDND1Q5T1B0 1012 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 TTC22Q5TAA0 569 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SH3PXD2AQ5TCZ1 1133 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 FAM171A1Q5VUB5 890 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 RNF43Q68DV7 783 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 CD300LGQ6UXG3 332 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 LONP2Q86WA8 852 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SKAP1Q86WV1 359 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 MAP4K3Q8IVH8 894 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 REXO1Q8N1G1 1221 aaKnown RBP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 C12orf50Q8NA57 414 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 FANCBQ8NB91 859 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 RNF149Q8NC42 400 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 DEFB124Q8NES8 71 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 HDAC7Q8WUI4 952 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 DNASE1L2Q92874 299 aa4.8□□□□□ -1.64
CALCOCO1-221ENST00000552623 SLC5A5Q92911 643 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms