RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 CCDC40Q4G0X9 1142 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 FAM26FQ5R3K3 315 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 FAM83BQ5T0W9 1011 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 KLHDC7AQ5VTJ3 777 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 SDE2Q6IQ49 451 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 LRRC31Q6UY01 552 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 DYMQ7RTS9 669 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 KRT26Q7Z3Y9 468 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 C12orf40Q86WS4 652 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 TEX2Q8IWB9 1127 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 SLFN12Q8IYM2 578 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 C1orf131Q8NDD1 294 aaKnown RBP6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 WDR89Q96FK6 387 aaPredicted RBP6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 CCDC17Q96LX7 622 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 MBOAT7Q96N66 472 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 CRAMP1Q96RY5 1269 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 SH3GL2Q99962 352 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 LRRC1Q9BTT6 524 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 MXD3Q9BW11 206 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 CCDC113Q9H0I3 377 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 JMJD4Q9H9V9 463 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 MLXIPQ9HAP2 919 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 FAM207AQ9NSI2 230 aaPredicted RBP6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 DDX25Q9UHL0 483 aaKnown RBP6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 PCDHA12Q9UN75 941 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 TFR2Q9UP52 801 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 RRP15Q9Y3B9 282 aaKnown RBP6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 ATP6V0A2Q9Y487 856 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 CORINQ9Y5Q5 1042 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 DUSP10Q9Y6W6 482 aa6.54□□□□□ -1.36
CHMP4A-210ENST00000552620 MYH1P12882 1939 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 A0A0A0MRY4 1105 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 FRMD3A2A2Y4 597 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 GOLGA6CA6NDK9 693 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 AGPSO00116 658 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 MYO1CO00159 1063 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 ZBTB5O15062 677 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 TBX3O15119 743 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 EPHB6O15197 1021 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 SLC37A4O43826 429 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 ARHGEF15O94989 841 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 TDP2O95551 362 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 PLEKP08567 350 aaPredicted RBP6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 PLA2G4BP0C869 781 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 GOLGA6DP0CG33 693 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 GRK4P32298 578 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 MAGEA9P43362 315 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 NAP1L1P55209 391 aaKnown RBP6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 RASSF7Q02833 373 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 RASA3Q14644 834 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 SLC18A3Q16572 532 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 DNAJC21Q5F1R6 531 aaKnown RBP6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 TMEM201Q5SNT2 666 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 MFSD14BQ5SR56 506 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 EMC10Q5UCC4 262 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 FRMD5Q7Z6J6 570 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 TRIM59Q8IWR1 403 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 CD302Q8IX05 232 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 ADGRF4Q8IZF3 695 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 MREGQ8N565 214 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 TAB3Q8N5C8 712 aaPredicted RBP6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 CELF2-AS1Q8N7Q2 184 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 ERMNQ8TAM6 284 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 TBC1D16Q8TBP0 767 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 UBASH3BQ8TF42 649 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 DCAF4Q8WV16 495 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 LMBR1Q8WVP7 490 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 HAS1Q92839 578 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 HPS3Q969F9 1004 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 COA7Q96BR5 231 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 PBKQ96KB5 322 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 RUSC1Q9BVN2 902 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 LSM14BQ9BX40 385 aaKnown RBP6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 TLR10Q9BXR5 811 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 WNT10AQ9GZT5 417 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 COA1Q9GZY4 146 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 CPVLQ9H3G5 476 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 PSTPIP2Q9H939 334 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 CYP4F12Q9HCS2 524 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 PLCB1Q9NQ66 1216 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 GDF3Q9NR23 364 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 GOLGA6AQ9NYA3 693 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 KCNK4Q9NYG8 393 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 FBXL5Q9UKA1 691 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 PCDHA2Q9Y5H9 948 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 CSADQ9Y600 493 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 CAPN6Q9Y6Q1 641 aa6.53□□□□□ -1.36
CHMP4A-210ENST00000552620 FRMPD2Q68DX3 1309 aaPredicted RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 TNRC6CQ9HCJ0 1690 aaKnown RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 DLL1O00548 723 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 CALUO43852 315 aaPredicted RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 GFPT2O94808 682 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 NOL4O94818 638 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 HLA-DOAP06340 250 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 AKR1B1P15121 316 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 RPL13P26373 211 aaKnown RBP6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 IRAK1P51617 712 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 CORO7P57737 925 aa6.52□□□□□ -1.37
CHMP4A-210ENST00000552620 TNNC1P63316 161 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms