RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LNX1Q8TBB1 728 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-210ENST00000551981 PAAF1Q9BRP4 392 aa15.7■□□□□ 0.1
CHMP1A-210ENST00000551981 RPP25Q9BUL9 199 aaKnown RBP15.7■□□□□ 0.1
CHMP1A-210ENST00000551981 DDX23Q9BUQ8 820 aaKnown RBP15.7■□□□□ 0.1
CHMP1A-210ENST00000551981 N4BP3O15049 544 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 USO1O60763 962 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 LRRN2O75325 713 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 POU2F2P09086 479 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 XRCC6P12956 609 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 MAML2Q8IZL2 1156 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 SUMF1Q8NBK3 374 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 MCPH1Q8NEM0 835 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 SLC7A14Q8TBB6 771 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 GJB4Q9NTQ9 266 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 NCDNQ9UBB6 729 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 CACNG4Q9UBN1 327 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 PCDHGA2Q9Y5H1 932 aa15.69■□□□□ 0.1
CHMP1A-210ENST00000551981 FAM170BA6NMN3 283 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 SDHBP21912 280 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 FAM187BQ17R55 369 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 PABPC1LQ4VXU2 614 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 EARS2Q5JPH6 523 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 AXDND1Q5T1B0 1012 aaPredicted RBP15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 CDCA2Q69YH5 1023 aaPredicted RBP15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 RTL10Q7L3V2 364 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 DCLK2Q8N568 766 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 GPR161Q8N6U8 529 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 ITFG1Q8TB96 612 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 PIGOQ8TEQ8 1089 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 ATRIPQ8WXE1 791 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 SECISBP2LQ93073 1101 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 KXD1Q9BQD3 176 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 ADPGKQ9BRR6 497 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 C2orf40Q9H1Z8 148 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 SNTG2Q9NY99 539 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 DLL3Q9NYJ7 618 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 KCNH3Q9ULD8 1083 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
CHMP1A-210ENST00000551981 GPR179Q6PRD1 2367 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 PTGESO14684 152 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 NCAM2O15394 837 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 NEMFO60524 1076 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 PFKFB2O60825 505 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 TXKP42681 527 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 CSTF1Q05048 431 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 NR5A1Q13285 461 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 PRPF4BQ13523 1007 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 RAB33AQ14088 237 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 VARS2Q5ST30 1063 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 ZBTB41Q5SVQ8 909 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 MAEAQ7L5Y9 396 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 NELL2Q99435 816 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 FZD8Q9H461 694 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 PDZD7Q9H5P4 517 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 LTB4R2Q9NPC1 389 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 GPRC5CQ9NQ84 441 aa15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 ORC3Q9UBD5 711 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-210ENST00000551981 RECQL4O94761 1208 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 ATP2B1P20020 1258 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 OR1D2P34982 312 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 MAPK6Q16659 721 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 RSPO4Q2I0M5 234 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 NPAS3Q8IXF0 933 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 TNFRSF25Q93038 417 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 GDE1Q9NZC3 331 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 MRPS17Q9Y2R5 130 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 MRPS23Q9Y3D9 190 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 MTF2Q9Y483 593 aaPredicted RBP15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 EPG5Q9HCE0 2579 aa15.66■□□□□ 0.1
CHMP1A-210ENST00000551981 COL4A3Q01955 1670 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 ADAM12O43184 909 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 TRAPPC3O43617 180 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 ECI2O75521 394 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 FGFR3P22607 806 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 RBM25P49756 843 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 NAB2Q15742 525 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 DCAF4L1Q3SXM0 396 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 ZNF852Q6ZMS4 543 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 TPRG1Q6ZUI0 275 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 APBB1IPQ7Z5R6 666 aaPredicted RBP15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 NACC1Q96RE7 527 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 HCFC1R1Q9NWW0 138 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 ZSCAN32Q9NX65 697 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 DNMT3BQ9UBC3 853 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 MTRRQ9UBK8 725 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 CDY1Q9Y6F8 540 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 NOTCH4Q99466 2003 aa15.65■□□□□ 0.1
CHMP1A-210ENST00000551981 A0A087WWV3 80 aa15.64■□□□□ 0.09
CHMP1A-210ENST00000551981 TMEM189-UBE2V1I3L0A0 370 aa15.64■□□□□ 0.09
CHMP1A-210ENST00000551981 ACKR2O00590 384 aa15.64■□□□□ 0.09
CHMP1A-210ENST00000551981 B3GAT3O94766 335 aa15.64■□□□□ 0.09
CHMP1A-210ENST00000551981 PRKCBP05771 671 aa15.64■□□□□ 0.09
CHMP1A-210ENST00000551981 LIG1P18858 919 aa15.64■□□□□ 0.09
CHMP1A-210ENST00000551981 CD72P21854 359 aa15.64■□□□□ 0.09
CHMP1A-210ENST00000551981 RPS9P46781 194 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms