RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 UVRAGQ9P2Y5 699 aa13.96□□□□□ -0.17
CACNB3-219ENST00000551544 ANAPC7Q9UJX3 599 aa13.96□□□□□ -0.17
CACNB3-219ENST00000551544 C5orf60A6NFR6 353 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 WDR46O15213 610 aaKnown RBP13.96□□□□□ -0.18
CACNB3-219ENST00000551544 RIPK2O43353 540 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 JAK3P52333 1124 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 SP4Q02446 784 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 CYP1B1Q16678 543 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 CCDC38Q502W7 563 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 C2CD6Q53TS8 623 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 C6orf118Q5T5N4 469 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 ARHGEF16Q5VV41 709 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 ACAD10Q6JQN1 1059 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 SLC39A4Q6P5W5 647 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 HOMEZQ8IX15 550 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 ART4Q93070 314 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 CEP170P1Q96L14 293 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.18
CACNB3-219ENST00000551544 RASGRF2O14827 1237 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 CHUKO15111 745 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 MAPK4P31152 587 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 MMP13P45452 471 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 ADCY2Q08462 1091 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 SLMAPQ14BN4 828 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 SGO2Q562F6 1265 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 LMBRD2Q68DH5 695 aaPredicted RBP13.95□□□□□ -0.18
CACNB3-219ENST00000551544 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 DDX1Q92499 740 aaKnown RBP13.95□□□□□ -0.18
CACNB3-219ENST00000551544 PDCD2LQ9BRP1 358 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 ADAM7Q9H2U9 754 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 CNOT7Q9UIV1 285 aaKnown RBP13.95□□□□□ -0.18
CACNB3-219ENST00000551544 USP20Q9Y2K6 914 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 COQ4Q9Y3A0 265 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 DNM1LO00429 736 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 HNRNPDLO14979 420 aaKnown RBP13.95□□□□□ -0.18
CACNB3-219ENST00000551544 SORBS3O60504 671 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 RASSF9O75901 435 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 RARGP13631 454 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 CYP24A1Q07973 514 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 TRIP13Q15645 432 aaPredicted RBP13.95□□□□□ -0.18
CACNB3-219ENST00000551544 FKBP1CQ5VVH2 108 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 ARMC9Q7Z3E5 817 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 SLC17A8Q8NDX2 589 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 ATG4AQ8WYN0 398 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 BICD1Q96G01 975 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 FAM213AQ9BRX8 229 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 PXMP2Q9NR77 195 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 INTS9Q9NV88 658 aaKnown RBP13.95□□□□□ -0.18
CACNB3-219ENST00000551544 GABBR1Q9UBS5 961 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 ASIC3Q9UHC3 531 aa13.95□□□□□ -0.18
CACNB3-219ENST00000551544 WNT10BO00744 389 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 ACSL3O95573 720 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 IFNAR2P48551 515 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 KRT76Q01546 638 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 KRT17Q04695 432 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 LLGL2Q6P1M3 1020 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 PSPC1Q8WXF1 523 aaKnown RBP13.94□□□□□ -0.18
CACNB3-219ENST00000551544 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 CENPTQ96BT3 561 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
CACNB3-219ENST00000551544 DDX23Q9BUQ8 820 aaKnown RBP13.94□□□□□ -0.18
CACNB3-219ENST00000551544 DNAJC17Q9NVM6 304 aaKnown RBP13.94□□□□□ -0.18
CACNB3-219ENST00000551544 AGTP01019 485 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 SFNP31947 248 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 CLEC16AQ2KHT3 1053 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 DAB2IPQ5VWQ8 1189 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 CYFIP1Q7L576 1253 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 NLRX1Q86UT6 975 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 ATXN2LQ8WWM7 1075 aaKnown RBP13.94□□□□□ -0.18
CACNB3-219ENST00000551544 MFSD14AQ96MC6 490 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 RUNDC3BQ96NL0 473 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 ACTR5Q9H9F9 607 aaPredicted RBP13.94□□□□□ -0.18
CACNB3-219ENST00000551544 CHST7Q9NS84 486 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 KLC4Q9NSK0 619 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 PGAP2Q9UHJ9 254 aa13.94□□□□□ -0.18
CACNB3-219ENST00000551544 SCP2P22307 547 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 LONRF1Q17RB8 773 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 ANKRD20A8PQ5CZ79 823 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 TTLL6Q8N841 843 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 TMC2Q8TDI7 906 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 LPAR1Q92633 364 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 PLVAPQ9BX97 442 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 MOV10L1Q9BXT6 1211 aaKnown RBP13.93□□□□□ -0.18
CACNB3-219ENST00000551544 LRRC19Q9H756 370 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 ADGRA3Q8IWK6 1321 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 MTMR2Q13614 643 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 AUHQ13825 339 aaKnown RBP13.93□□□□□ -0.18
CACNB3-219ENST00000551544 OTUD6AQ7L8S5 288 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 USP37Q86T82 979 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 LRRC34Q8IZ02 419 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 RTKN2Q8IZC4 609 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 GPD1LQ8N335 351 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 ZNF317Q96PQ6 595 aaPredicted RBP13.93□□□□□ -0.18
CACNB3-219ENST00000551544 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
CACNB3-219ENST00000551544 CDC42EP4Q9H3Q1 356 aaKnown RBP13.93□□□□□ -0.18
CACNB3-219ENST00000551544 TELO2Q9Y4R8 837 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 PCDHA10Q9Y5I2 948 aa13.93□□□□□ -0.18
CACNB3-219ENST00000551544 FSCN2O14926 492 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms