RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 GUCD1Q96NT3 240 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 CDC5LQ99459 802 aaKnown RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 MENTQ9BUN1 341 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 IDI2Q9BXS1 227 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ANKRD2Q9GZV1 360 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 CCDC8Q9H0W5 538 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 DNAJC18Q9H819 358 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SP110Q9HB58 689 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 DDX4Q9NQI0 724 aaKnown RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 KCNH7Q9NS40 1196 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 TOMM22Q9NS69 142 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 RIC8BQ9NVN3 520 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 H2AFY2Q9P0M6 372 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 MYOTQ9UBF9 498 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 KCNG1Q9UIX4 513 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 JAG2Q9Y219 1238 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 NCOR1O75376 2440 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ZSWIM8A7E2V4 1837 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SALL1Q9NSC2 1324 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 FANCIQ9NVI1 1328 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 TRANK1O15050 2925 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CCL15-CCL14A0A0B4J2E2 113 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 ZC3H12DA2A288 527 aaKnown RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 DDTLA6NHG4 134 aaPredicted RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 GOLGA8AA7E2F4 631 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 GOLGA8BA8MQT2 603 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 F8W031 263 aaPredicted RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 K7ESF4 209 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CXCL11O14625 94 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 SGSM2O43147 1006 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 TGM5O43548 720 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PEX10O60683 326 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 TADA3O75528 432 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PDE8BO95263 885 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CFBP00751 764 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CYBBP04839 570 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 MPOP05164 745 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 RNASE1P07998 156 aaKnown RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 DBHP09172 617 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 MYBL2P10244 700 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CYP2C8P10632 490 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PTPN1P18031 435 aaKnown RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CD40P25942 277 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 SDHAP31040 664 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PRMT2P55345 433 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PHC1P78364 1004 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PRKCZQ05513 592 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 MCL1Q07820 350 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 ADCY1Q08828 1119 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 TMEM62Q0P6H9 643 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 SLC9A5Q14940 896 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PPP2R5AQ15172 486 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 TERF2Q15554 542 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CCL15Q16663 113 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 SUPT20HL1Q3ZLR7 823 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 MFSD14BQ5SR56 506 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 GPR158Q5T848 1215 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CCDC30Q5VVM6 783 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CREB3L3Q68CJ9 461 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 FAM109BQ6ICB4 259 aaPredicted RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CDC42EP5Q6NZY7 148 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PAQR3Q6TCH7 311 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 FRMD7Q6ZUT3 714 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 MILR1Q7Z6M3 343 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 NLRX1Q86UT6 975 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 NOSTRINQ8IVI9 506 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 ZNF610Q8N9Z0 462 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 U2AF1L4Q8WU68 220 aaKnown RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 FAM151AQ8WW52 585 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CHMP4CQ96CF2 233 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 ELF4Q99607 663 aaPredicted RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 YIPF4Q9BSR8 244 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 TRIM8Q9BZR9 551 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CD244Q9BZW8 370 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PNNQ9H307 717 aaKnown RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 RC3H2Q9HBD1 1191 aaKnown RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 TXNRD2Q9NNW7 524 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 AASDHPPTQ9NRN7 309 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 GEMIN8Q9NWZ8 242 aaKnown RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.92□□□□□ -1.94
CPSF6-207ENST00000551516 ASH2LQ9UBL3 628 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 HDAC9Q9UKV0 1011 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 OGDHLQ9ULD0 1010 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 CTNND2Q9UQB3 1225 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 STXBP5LQ9Y2K9 1186 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 SLC45A1Q9Y2W3 748 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 PCDHB4Q9Y5E5 795 aa2.92□□□□□ -1.94
CPSF6-207ENST00000551516 OTOFQ9HC10 1997 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 TCRBV5S2A0A599 114 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PRAMEF25A6NGN4 478 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 NOTOA8MTQ0 251 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 GRM8O00222 908 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 PDHXO00330 501 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 DVL2O14641 736 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 GABRDO14764 452 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 FOXP2O15409 715 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 SRGAP3O43295 1099 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 BUB1BO60566 1050 aaPredicted RBP2.91□□□□□ -1.94
CPSF6-207ENST00000551516 CNMDO75829 334 aa2.91□□□□□ -1.94
CPSF6-207ENST00000551516 SNUPNO95149 360 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms