RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 COMTP21964 271 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 MCM7P33993 719 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 PURAQ00577 322 aaKnown RBP4.53□□□□□ -1.68
SCAF11-215ENST00000551391 DSC2Q02487 901 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 SMN1Q16637 294 aaKnown RBP4.53□□□□□ -1.68
SCAF11-215ENST00000551391 USP39Q53GS9 565 aaKnown RBP4.53□□□□□ -1.68
SCAF11-215ENST00000551391 MAMDC4Q6UXC1 1216 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 EPM2AIP1Q7L775 607 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-215ENST00000551391 TTC7BQ86TV6 843 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 FMNL3Q8IVF7 1028 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 TPH2Q8IWU9 490 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 RHOT1Q8IXI2 618 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 MYO1HQ8N1T3 1032 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 MAGEB6Q8N7X4 407 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 SLC35G2Q8TBE7 412 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 MDM1Q8TC05 714 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 ARL8AQ96BM9 186 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 CHFRQ96EP1 664 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 UHRF1Q96T88 793 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-215ENST00000551391 GTPBP4Q9BZE4 634 aaKnown RBP4.53□□□□□ -1.68
SCAF11-215ENST00000551391 NMRK2Q9NPI5 230 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 TMEM140Q9NV12 185 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 FAM30AQ9NZY2 134 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 CLCA2Q9UQC9 943 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 SH3BP1Q9Y3L3 701 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 PCDHB1Q9Y5F3 818 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 PCDHA13Q9Y5I0 950 aa4.53□□□□□ -1.68
SCAF11-215ENST00000551391 ZMYM3Q14202 1370 aa4.53□□□□□ -1.69
SCAF11-215ENST00000551391 GOLGA6CA6NDK9 693 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 GOLGA6BA6NDN3 693 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 B5MCH6 92 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 SLC16A6O15403 523 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 PJA2O43164 708 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MFAP3LO75121 409 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 OFD1O75665 1012 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 IPO13O94829 963 aaKnown RBP4.52□□□□□ -1.69
SCAF11-215ENST00000551391 GOLGA6DP0CG33 693 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 HSPA6P17066 643 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 PTPN7P35236 360 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MSX2P35548 267 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-215ENST00000551391 INHBEP58166 350 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 PTH1RQ03431 593 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 IL10RAQ13651 578 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 RAB39AQ14964 217 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 LSM12Q3MHD2 195 aaKnown RBP4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MINDY4Q4G0A6 757 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MFSD14BQ5SR56 506 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 THEMIS2Q5TEJ8 643 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 OTUD7BQ6GQQ9 843 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 B3GNT9Q6UX72 402 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 Q6ZSN1 163 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 GPRIN1Q7Z2K8 1008 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 FAM83AQ86UY5 434 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 ANKRD35Q8N283 1001 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 D2HGDHQ8N465 521 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 REPS2Q8NFH8 660 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MDGA1Q8NFP4 955 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 NSUN6Q8TEA1 469 aaKnown RBP4.52□□□□□ -1.69
SCAF11-215ENST00000551391 EDAQ92838 391 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 TSR2Q969E8 191 aaKnown RBP4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MIEF2Q96C03 454 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 CLIP3Q96DZ5 547 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 C1GALT1C1Q96EU7 318 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MVB12AQ96EY5 273 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 ZNF503Q96F45 646 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MRGPRX4Q96LA9 322 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 SENP6Q9GZR1 1112 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-215ENST00000551391 KCNH6Q9H252 994 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 TDP1Q9NUW8 608 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 GOLGA6AQ9NYA3 693 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MOCS1Q9NZB8 636 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 CALCOCO1Q9P1Z2 691 aa4.52□□□□□ -1.69
SCAF11-215ENST00000551391 MYBBP1AQ9BQG0 1328 aaKnown RBP4.51□□□□□ -1.69
SCAF11-215ENST00000551391 TBKBP1A7MCY6 615 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 PRPF3O43395 683 aaKnown RBP4.51□□□□□ -1.69
SCAF11-215ENST00000551391 GPR32O75388 356 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 STC2O76061 302 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 DDCP20711 480 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 FXR1P51114 621 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCAF11-215ENST00000551391 CTXN1P60606 82 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 HHEXQ03014 270 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 TARDBPQ13148 414 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCAF11-215ENST00000551391 MTM1Q13496 603 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 MLC1Q15049 377 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 PGS1Q32NB8 556 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 IFIT1BQ5T764 474 aaKnown RBP4.51□□□□□ -1.69
SCAF11-215ENST00000551391 DRICH1Q6PGQ1 229 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-215ENST00000551391 CATIPQ7Z7H3 387 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 DRC7Q8IY82 874 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 IFI44Q8TCB0 444 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 CCHCR1Q8TD31 782 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 ST8SIA2Q92186 375 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 EXTL1Q92935 676 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 CEP95Q96GE4 821 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 FAM89AQ96GI7 184 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 TMEM176AQ96HP8 235 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 C8orf48Q96LL4 319 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 DMRTA2Q96SC8 542 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 MAP3K14Q99558 947 aa4.51□□□□□ -1.69
SCAF11-215ENST00000551391 ANLNQ9NQW6 1124 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms