RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 COLEC11Q9BWP8 271 aa12.32□□□□□ -0.44
BRF1-218ENST00000550692 RAPGEFL1Q9UHV5 662 aa12.32□□□□□ -0.44
BRF1-218ENST00000550692 CD207Q9UJ71 328 aa12.32□□□□□ -0.44
BRF1-218ENST00000550692 IRAK3Q9Y616 596 aa12.32□□□□□ -0.44
BRF1-218ENST00000550692 H0YCG3 227 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 CLASP2O75122 1294 aaKnown RBP12.31□□□□□ -0.44
BRF1-218ENST00000550692 NR1I2O75469 434 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 SOD2P04179 222 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 MCF2P10911 925 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 PTMSP20962 102 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 SEZ6Q53EL9 994 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 ZPBP2Q6X784 338 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 TMEM184AQ6ZMB5 413 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 RNF168Q8IYW5 571 aaPredicted RBP12.31□□□□□ -0.44
BRF1-218ENST00000550692 STAMQ92783 540 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 KCNN1Q92952 543 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 DNAJC19Q96DA6 116 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 BICD1Q96G01 975 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 CCDC94Q9BW85 323 aaPredicted RBP12.31□□□□□ -0.44
BRF1-218ENST00000550692 GPR62Q9BZJ7 368 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 HAPLN2Q9GZV7 340 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 ANKFY1Q9P2R3 1169 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 TBX20Q9UMR3 447 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 HCFC2Q9Y5Z7 792 aa12.31□□□□□ -0.44
BRF1-218ENST00000550692 FAM237AA0A1B0GTK4 181 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 SMIM28A0A1B0GU29 152 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 C2CD2LO14523 706 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 CLDN3O15551 220 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 LILRB3O75022 631 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 GADD45BO75293 160 aaPredicted RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 IGFBP6P24592 240 aaPredicted RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 YARSP54577 528 aaKnown RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 GTF2BQ00403 316 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 MCL1Q07820 350 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 COASYQ13057 564 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 HSP90AA2PQ14568 343 aaPredicted RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.44
BRF1-218ENST00000550692 E2F4Q16254 413 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 ZC2HC1CQ53FD0 456 aaPredicted RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 FUT10Q6P4F1 479 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 SYCE2Q6PIF2 218 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 ALKAL1Q6UXT8 129 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 SFR1Q86XK3 245 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 HASPINQ8TF76 798 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 B3GALT6Q96L58 329 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 ZMAT2Q96NC0 199 aaKnown RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 ACAP3Q96P50 834 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 PPP1R10Q96QC0 940 aaKnown RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 CD320Q9NPF0 282 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 TOPORSQ9NS56 1045 aaPredicted RBP12.3□□□□□ -0.44
BRF1-218ENST00000550692 TBC1D7Q9P0N9 293 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 STK39Q9UEW8 545 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 ADAM28Q9UKQ2 775 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
BRF1-218ENST00000550692 A0A1B0GVL5 298 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 FSD2A1L4K1 749 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 HNRNPDLO14979 420 aaKnown RBP12.29□□□□□ -0.44
BRF1-218ENST00000550692 TADA2AO75478 443 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 KIF4AO95239 1232 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 PIGRP01833 764 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 URODP06132 367 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 CNPP09543 421 aaKnown RBP12.29□□□□□ -0.44
BRF1-218ENST00000550692 IDEP14735 1019 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 COL9A1P20849 921 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 MATR3P43243 847 aaKnown RBP eCLIP12.29□□□□□ -0.441e-8■■■■□ 25.4
BRF1-218ENST00000550692 LIG4P49917 911 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 SOX4Q06945 474 aaPredicted RBP12.29□□□□□ -0.44
BRF1-218ENST00000550692 SMAD2Q15796 467 aaKnown RBP12.29□□□□□ -0.44
BRF1-218ENST00000550692 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 KIAA0319Q5VV43 1072 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 ANKRD54Q6NXT1 300 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 SLC39A4Q6P5W5 647 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 ZNF720Q7Z2F6 126 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 SMRP1Q8NCR6 262 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 DHX58Q96C10 678 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 SNX27Q96L92 541 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 KLHL5Q96PQ7 755 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 APOL5Q9BWW9 433 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 ST6GALNAC4Q9H4F1 302 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 GOLGA2P5Q9HBQ8 144 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 MRPL17Q9NRX2 175 aaKnown RBP12.29□□□□□ -0.44
BRF1-218ENST00000550692 CHST7Q9NS84 486 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 USP25Q9UHP3 1055 aa12.29□□□□□ -0.44
BRF1-218ENST00000550692 C5orf42Q9H799 3197 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 CITO14578 2027 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 TISP43B9A030 160 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 PPP1R37O75864 691 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 KCNE1P15382 129 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 EPCAMP16422 314 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 SCP2P22307 547 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 SYKP43405 635 aa12.28□□□□□ -0.44
BRF1-218ENST00000550692 GLUD2P49448 558 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms