RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 URGCPQ8TCY9 931 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 HASPINQ8TF76 798 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 ADPGKQ9BRR6 497 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 TCHPQ9BT92 498 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 CUEDC2Q9H467 287 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 MRPL44Q9H9J2 332 aaKnown RBP12.27□□□□□ -0.45
RAB5B-208ENST00000550283 OLFML3Q9NRN5 406 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 LMCD1Q9NZU5 365 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 TRIP11Q15643 1979 aa12.27□□□□□ -0.45
RAB5B-208ENST00000550283 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 SMIM28A0A1B0GU29 152 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 HNRNPDLO14979 420 aaKnown RBP12.26□□□□□ -0.45
RAB5B-208ENST00000550283 KIF4AO95239 1232 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 GAP43P17677 238 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 ACOT2P49753 483 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 LIG4P49917 911 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 KCNQ1P51787 676 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 COL19A1Q14993 1142 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 ENOX2Q16206 610 aaKnown RBP12.26□□□□□ -0.45
RAB5B-208ENST00000550283 L1TD1Q5T7N2 865 aaKnown RBP12.26□□□□□ -0.45
RAB5B-208ENST00000550283 RNF168Q8IYW5 571 aaPredicted RBP12.26□□□□□ -0.45
RAB5B-208ENST00000550283 FMR1NBQ8N0W7 255 aaPredicted RBP12.26□□□□□ -0.45
RAB5B-208ENST00000550283 BICD1Q96G01 975 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 CBWD1Q9BRT8 395 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 GPR62Q9BZJ7 368 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 ZBP1Q9H171 429 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 NSUN3Q9H649 340 aaKnown RBP12.26□□□□□ -0.45
RAB5B-208ENST00000550283 IGFLR1Q9H665 355 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 UBN1Q9NPG3 1134 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 TLR9Q9NR96 1032 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 TUBGCP4Q9UGJ1 667 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 ATP6V1DQ9Y5K8 247 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 STYXL1Q9Y6J8 313 aa12.26□□□□□ -0.45
RAB5B-208ENST00000550283 TDRD15B5MCY1 1934 aaKnown RBP12.26□□□□□ -0.45
RAB5B-208ENST00000550283 TTC26A0AVF1 554 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 LACTBL1A8MY62 500 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 PPEF2O14830 753 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 CLDN3O15551 220 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 TGFB1I1O43294 461 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 TBX10O75333 385 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 ZNF202O95125 648 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 SYKP43405 635 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 NRIP1P48552 1158 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 ALDH7A1P49419 539 aaKnown RBP12.25□□□□□ -0.45
RAB5B-208ENST00000550283 GRIK3Q13003 919 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 STK4Q13043 487 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
RAB5B-208ENST00000550283 CTC1Q2NKJ3 1217 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 KMT5BQ4FZB7 885 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 KRBA2Q6ZNG9 492 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 UNC13DQ70J99 1090 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 CCDC65Q8IXS2 484 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 VPS52Q8N1B4 723 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 KIAA0895Q8NCT3 520 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 SCFD1Q8WVM8 642 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 SAAL1Q96ER3 474 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 TCF25Q9BQ70 676 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 TMEM175Q9BSA9 504 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 LMAN2LQ9H0V9 348 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 SLC39A2Q9NP94 309 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 AAASQ9NRG9 546 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 CNTN3Q9P232 1028 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 SEL1LQ9UBV2 794 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 CDH22Q9UJ99 828 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 CPSF3Q9UKF6 684 aaKnown RBP12.25□□□□□ -0.45
RAB5B-208ENST00000550283 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
RAB5B-208ENST00000550283 FAN1Q9Y2M0 1017 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 C5orf42Q9H799 3197 aa12.25□□□□□ -0.45
RAB5B-208ENST00000550283 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.24□□□□□ -0.45
RAB5B-208ENST00000550283 GOLGA8IPA6NC78 632 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 C2orf71A6NGG8 1288 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 GOLGA8JA6NMD2 632 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 H3BQ06 376 aaPredicted RBP12.24□□□□□ -0.45
RAB5B-208ENST00000550283 I3L4J1 428 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 LILRB3O75022 631 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 NR1I2O75469 434 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 ALDH2P05091 517 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 THP07101 528 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 CLCNKBP51801 687 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 DPYDQ12882 1025 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 TUSC3Q13454 348 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 KCNC3Q14003 757 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 PTPROQ16827 1216 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 FAM26FQ5R3K3 315 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 KANK3Q6NY19 840 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 DDX53Q86TM3 631 aaKnown RBP12.24□□□□□ -0.45
RAB5B-208ENST00000550283 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 ACAP3Q96P50 834 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 RPS6KC1Q96S38 1066 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 MSTO1Q9BUK6 570 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
RAB5B-208ENST00000550283 PCIF1Q9H4Z3 704 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 CLEC1BQ9P126 229 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 KANSL3Q9P2N6 904 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 LZTS1Q9Y250 596 aa12.24□□□□□ -0.45
RAB5B-208ENST00000550283 H0YCG3 227 aa12.23□□□□□ -0.45
RAB5B-208ENST00000550283 OGTO15294 1046 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms