RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 MYO10Q9HD67 2058 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 SMIM28A0A1B0GU29 152 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 ANKRD63C9JTQ0 380 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 I3L4J1 428 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 K7ENM7 598 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 TRAK2O60296 914 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 BRD1O95696 1058 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 SOD2P04179 222 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 KRT18P05783 430 aaKnown RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 THP07101 528 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 RPL17P18621 184 aaKnown RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 TNFSF9P41273 254 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 SMTNP53814 917 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 SPAG1Q07617 926 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 HSP90AA2PQ14568 343 aaPredicted RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 SMAD2Q15796 467 aaKnown RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 XKR4Q5GH76 650 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 KIAA0319Q5VV43 1072 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 FUT10Q6P4F1 479 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 PRSS55Q6UWB4 352 aaPredicted RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 ALKAL1Q6UXT8 129 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 DDX12PQ92771 950 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 C18orf25Q96B23 403 aaPredicted RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 CDCA3Q99618 268 aaPredicted RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 COLEC11Q9BWP8 271 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 PARVGQ9HBI0 331 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 LARSQ9P2J5 1176 aaKnown RBP10.72□□□□□ -0.69
HDAC7-229ENST00000549883 STK17AQ9UEE5 414 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 TBX20Q9UMR3 447 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 IRAK3Q9Y616 596 aa10.72□□□□□ -0.69
HDAC7-229ENST00000549883 FAM189A1O60320 539 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 PPP6R2O75170 966 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 TBCAO75347 108 aaKnown RBP10.71□□□□□ -0.69
HDAC7-229ENST00000549883 TOM1L1O75674 476 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 SPATA31D3P0C874 917 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 MCF2P10911 925 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 STAT6P42226 847 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 CLCNKBP51801 687 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 CASP5P51878 434 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 KCNA1Q09470 495 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 STRN3Q13033 797 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 E2F4Q16254 413 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 SLC10A6Q3KNW5 377 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 PUS10Q3MIT2 529 aaKnown RBP10.71□□□□□ -0.69
HDAC7-229ENST00000549883 RTP2Q5QGT7 225 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 GLYCTKQ8IVS8 523 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 GJD3Q8N144 294 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 GLIS3Q8NEA6 775 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 ZSWIM2Q8NEG5 633 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 SUSD6Q92537 303 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 HPS3Q969F9 1004 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 SNX27Q96L92 541 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 ZNF396Q96N95 335 aaPredicted RBP10.71□□□□□ -0.69
HDAC7-229ENST00000549883 ACAP3Q96P50 834 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 CHST7Q9NS84 486 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 ADAM28Q9UKQ2 775 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 PCDHA7Q9UN72 937 aa10.71□□□□□ -0.69
HDAC7-229ENST00000549883 DENND4AQ7Z401 1863 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 TEX28O15482 410 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 ADAM12O43184 909 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 TADA2AO75478 443 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 YEATS4O95619 227 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 URODP06132 367 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 CXCL8P10145 99 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 SP100P23497 879 aaPredicted RBP10.7□□□□□ -0.7
HDAC7-229ENST00000549883 KLRC2P26717 231 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 CASP1P29466 404 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
HDAC7-229ENST00000549883 BRCC3P46736 316 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 GLUD2P49448 558 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 CLCN4P51793 760 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 GUCY2FP51841 1108 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 GTF2BQ00403 316 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 DSG1Q02413 1049 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 MCL1Q07820 350 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 NOLC1Q14978 699 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC7-229ENST00000549883 RARS2Q5T160 578 aaKnown RBP10.7□□□□□ -0.7
HDAC7-229ENST00000549883 ZPBP2Q6X784 338 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 SV2BQ7L1I2 683 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 ADHFE1Q8IWW8 467 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 RIN2Q8WYP3 895 aaPredicted RBP10.7□□□□□ -0.7
HDAC7-229ENST00000549883 CASP10Q92851 521 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 KCNN1Q92952 543 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 DHX58Q96C10 678 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 BICD1Q96G01 975 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 CCDC94Q9BW85 323 aaPredicted RBP10.7□□□□□ -0.7
HDAC7-229ENST00000549883 MRPL17Q9NRX2 175 aaKnown RBP10.7□□□□□ -0.7
HDAC7-229ENST00000549883 BDP1A6H8Y1 2624 aa10.7□□□□□ -0.7
HDAC7-229ENST00000549883 SCN1AP35498 2009 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
HDAC7-229ENST00000549883 HNRNPDLO14979 420 aaKnown RBP10.69□□□□□ -0.7
HDAC7-229ENST00000549883 CLDN3O15551 220 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 CUTAO60888 179 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 PPP1R37O75864 691 aa10.69□□□□□ -0.7
HDAC7-229ENST00000549883 PIGRP01833 764 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms