RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SPDYCQ5MJ68 293 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 CTNNBL1Q8WYA6 563 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-206ENST00000549505 SAAL1Q96ER3 474 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 STIM2Q9P246 746 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 COG5Q9UP83 839 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 TNFSF13BQ9Y275 285 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 PCDHB2Q9Y5E7 798 aa10.75□□□□□ -0.69
RAB5B-206ENST00000549505 SGPL1O95470 568 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 HSPA6P17066 643 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 CDH5P33151 784 aaPredicted RBP10.74□□□□□ -0.69
RAB5B-206ENST00000549505 NLRP11P59045 1033 aaKnown RBP10.74□□□□□ -0.69
RAB5B-206ENST00000549505 PTENP60484 403 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 MAP2K1Q02750 393 aaPredicted RBP10.74□□□□□ -0.69
RAB5B-206ENST00000549505 CENPCQ03188 943 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 HSDL1Q3SXM5 330 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 RPUSD2Q8IZ73 545 aaKnown RBP10.74□□□□□ -0.69
RAB5B-206ENST00000549505 ANKRD13CQ8N6S4 541 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 TMEM143Q96AN5 459 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 SH2D3AQ9BRG2 576 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 PSD3Q9NYI0 1048 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 OGTO15294 1046 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 BUB1BO60566 1050 aaPredicted RBP10.74□□□□□ -0.69
RAB5B-206ENST00000549505 PEX5P50542 639 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 WNT7BP56706 349 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 ARID5AQ03989 594 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 PRKG1Q13976 671 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 TFDP1Q14186 410 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 PCBP1Q15365 356 aaKnown RBP eCLIP10.74□□□□□ -0.693e-8■■■□□ 16.8
RAB5B-206ENST00000549505 CYP1B1Q16678 543 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 MOB2Q70IA6 237 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 ARMCX2Q7L311 632 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 PALB2Q86YC2 1186 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 METTL13Q8N6R0 699 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 RDH13Q8NBN7 331 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 SLC20A1Q8WUM9 679 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 PRPF31Q8WWY3 499 aaKnown RBP10.74□□□□□ -0.69
RAB5B-206ENST00000549505 ARHGEF26Q96DR7 871 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 SLC10A4Q96EP9 437 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 FAM213AQ9BRX8 229 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 MED4Q9NPJ6 270 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 RBM12Q9NTZ6 932 aaKnown RBP10.74□□□□□ -0.69
RAB5B-206ENST00000549505 TAS2R14Q9NYV8 317 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 AMFRQ9UKV5 643 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 TRPM7Q96QT4 1865 aa10.74□□□□□ -0.69
RAB5B-206ENST00000549505 SEC31AO94979 1220 aaKnown RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 MBTD1Q05BQ5 628 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 C2orf54Q08AI8 447 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 AMHR2Q16671 573 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 FAM110CQ1W6H9 321 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 PHF13Q86YI8 300 aaPredicted RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 LRRC1Q9BTT6 524 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 THAP2Q9H0W7 228 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 WNT8AQ9H1J5 351 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 ERAP1Q9NZ08 941 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 PTPRJQ12913 1337 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 GOLGA8IPA6NC78 632 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 SLC15A5A6NIM6 579 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 GOLGA8JA6NMD2 632 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 BTBD19C9JJ37 291 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 PGRMC1O00264 195 aaKnown RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 LRRN2O75325 713 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 ASS1P00966 412 aaKnown RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 GH1P01241 217 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 HLA-DRAP01903 254 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 DRG2P55039 364 aaKnown RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 CASP8Q14790 479 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 EMC10Q5UCC4 262 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 C12orf50Q8NA57 414 aaPredicted RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 BRI3BPQ8WY22 251 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 KAT5Q92993 513 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 SH3GL2Q99962 352 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 FAM129AQ9BZQ8 928 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 RBAKQ9NYW8 714 aaPredicted RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 PDHXO00330 501 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 IL18RAPO95256 599 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 FTCDO95954 541 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 FTLP02792 175 aaPredicted RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 CLTAP09496 248 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 RHOXF2BP0C7M4 288 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 MAN1A1P33908 653 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 CTNNA1P35221 906 aaKnown RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 EPHB4P54760 987 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 TNNC1P63316 161 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 CUL2Q13617 745 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 SPRYD7Q5W111 196 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 MPZL3Q6UWV2 235 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 ZBTB8OSQ8IWT0 167 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 CD302Q8IX05 232 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 CXorf38Q8TB03 319 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 USP6NLQ92738 828 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 SLCO2A1Q92959 643 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 SPATA33Q96N06 139 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 NAP1L3Q99457 506 aaPredicted RBP10.73□□□□□ -0.69
RAB5B-206ENST00000549505 RHOXF2Q9BQY4 288 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 C16orf70Q9BSU1 422 aa10.73□□□□□ -0.69
RAB5B-206ENST00000549505 PEX10O60683 326 aa10.72□□□□□ -0.69
RAB5B-206ENST00000549505 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
RAB5B-206ENST00000549505 MAPK4P31152 587 aa10.72□□□□□ -0.69
RAB5B-206ENST00000549505 NKX3-2P78367 333 aa10.72□□□□□ -0.69
RAB5B-206ENST00000549505 MORN1Q5T089 497 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms