RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 CASTOR2A6NHX0 329 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 MAN2B1O00754 1011 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 HRO43593 1189 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 DKC1O60832 514 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 ARF4P18085 180 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 NLRP5P59047 1200 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 PTENP60484 403 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 GRM2Q14416 872 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 EMC2Q15006 297 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 N4BP2L1Q5TBK1 243 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 PIK3R5Q8WYR1 880 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 DDX1Q92499 740 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 SLC26A6Q9BXS9 759 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 CHRDQ9H2X0 955 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 WDR81Q562E7 1941 aa12.01□□□□□ -0.49
TRAFD1-206ENST00000549358 ZBTB39O15060 712 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 KIF4AO95239 1232 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 NPTXRO95502 500 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 P4HBP07237 508 aaKnown RBP12□□□□□ -0.49
TRAFD1-206ENST00000549358 CPA1P15085 419 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 YWHABP31946 246 aaKnown RBP12□□□□□ -0.49
TRAFD1-206ENST00000549358 OR1D2P34982 312 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 CCR3P51677 355 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 SRSF5Q13243 272 aaKnown RBP12□□□□□ -0.49
TRAFD1-206ENST00000549358 TUSC3Q13454 348 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 RAB33AQ14088 237 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
TRAFD1-206ENST00000549358 SLC5A9Q2M3M2 681 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 UVSSAQ2YD98 709 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 XKR9Q5GH70 373 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 IL31Q6EBC2 164 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12□□□□□ -0.49
TRAFD1-206ENST00000549358 FAM3CQ92520 227 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 DNASE1L2Q92874 299 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 ELSPBP1Q96BH3 223 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 MTRQ99707 1265 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 BRD9Q9H8M2 597 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 GDE1Q9NZC3 331 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 DDX25Q9UHL0 483 aaKnown RBP12□□□□□ -0.49
TRAFD1-206ENST00000549358 PPME1Q9Y570 386 aa12□□□□□ -0.49
TRAFD1-206ENST00000549358 MTCL1Q9Y4B5 1905 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 CHURC1-FNTBB4DL54 471 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 B4GALT5O43286 388 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 RHOP08100 348 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 POU2F2P09086 479 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 PMLP29590 882 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 CXCL12P48061 93 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 FNTBP49356 437 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 SATB1Q01826 763 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 MBTD1Q05BQ5 628 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 PPP2R5CQ13362 524 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 TFDP1Q14186 410 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 NTRK3Q16288 839 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 AMHR2Q16671 573 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 PDXDC1Q6P996 788 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 SLC27A1Q6PCB7 646 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 Q6ZUG5 572 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 BRF1Q92994 677 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 TRMT61BQ9BVS5 477 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 RNF26Q9BY78 433 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 C22orf23Q9BZE7 217 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 VAV3Q9UKW4 847 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 PCDHA4Q9UN74 947 aa11.99□□□□□ -0.49
TRAFD1-206ENST00000549358 A0A1B0GUA9 196 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 SLC37A4O43826 429 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 HMGB1P09429 215 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 CEBPBP17676 345 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 PTPN2P17706 415 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 FCARP24071 287 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 FAM78AQ5JUQ0 283 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 C4orf19Q8IY42 314 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 IRF7Q92985 503 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 LXNQ9BS40 222 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 IER2Q9BTL4 223 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 ZFP14Q9HCL3 533 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 SH3GLB2Q9NR46 395 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 RGL1Q9NZL6 768 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 CDY1Q9Y6F8 540 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 CHD6Q8TD26 2715 aa11.98□□□□□ -0.49
TRAFD1-206ENST00000549358 NRG2O14511 850 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 FOXD2O60548 495 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 THP07101 528 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 CHRNB1P11230 501 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 IGFBP6P24592 240 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 GDI1P31150 447 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 CNR2P34972 360 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 SHC2P98077 582 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 POU5F1BQ06416 359 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 CAPSQ13938 189 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 GAS6Q14393 721 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 KRT32Q14532 448 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 AASDHQ4L235 1098 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 HEATR6Q6AI08 1181 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 MOXD1Q6UVY6 613 aa11.97□□□□□ -0.49
TRAFD1-206ENST00000549358 MAP4K3Q8IVH8 894 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms