RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ZPBP2Q6X784 338 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 DNAJC19Q96DA6 116 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 MSLNLQ96KJ4 702 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 ACAP3Q96P50 834 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 FIZ1Q96SL8 496 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 GPR62Q9BZJ7 368 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 TOPORSQ9NS56 1045 aaPredicted RBP17.26■□□□□ 0.35
DDX54-205ENST00000548786 ADAM28Q9UKQ2 775 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 CFAP45Q9UL16 551 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
DDX54-205ENST00000548786 TNFRSF10AO00220 468 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 MEFVO15553 781 aaPredicted RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 MBTPS2O43462 519 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 EPCAMP16422 314 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 IGFBP6P24592 240 aaPredicted RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 GLUD2P49448 558 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 SPAG1Q07617 926 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 SMAD4Q13485 552 aaKnown RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 NAB2Q15742 525 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 ZBTB41Q5SVQ8 909 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 KIAA1841Q6NSI8 718 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 FUT10Q6P4F1 479 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 GLYCTKQ8IVS8 523 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 TMEM130Q8N3G9 435 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 SNX27Q96L92 541 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 ZMAT2Q96NC0 199 aaKnown RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 PPP1R10Q96QC0 940 aaKnown RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 HERC2P3Q9BVR0 1158 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 MRPL44Q9H9J2 332 aaKnown RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 MRPL17Q9NRX2 175 aaKnown RBP17.25■□□□□ 0.35
DDX54-205ENST00000548786 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 HCFC2Q9Y5Z7 792 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 MUC3AQ02505 3323 aa17.25■□□□□ 0.35
DDX54-205ENST00000548786 SMIM28A0A1B0GU29 152 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 POLR2DO15514 142 aaKnown RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 CNPP09543 421 aaKnown RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 SRGAP2BP0DMP2 458 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 CXCL8P10145 99 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 KLRC2P26717 231 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 SSTR3P32745 418 aaPredicted RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 TNFSF9P41273 254 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 CLCNKBP51801 687 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 SOX4Q06945 474 aaPredicted RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 MCL1Q07820 350 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 E2F4Q16254 413 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 PUS10Q3MIT2 529 aaKnown RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 HERC4Q5GLZ8 1057 aaPredicted RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 ANKRD54Q6NXT1 300 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 KANK3Q6NY19 840 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 SLC39A4Q6P5W5 647 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 C18orf25Q96B23 403 aaPredicted RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 MSTO1Q9BUK6 570 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 FGFBP2Q9BYJ0 223 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 PANK4Q9NVE7 773 aa17.24■□□□□ 0.35
DDX54-205ENST00000548786 USP15Q9Y4E8 981 aaPredicted RBP17.24■□□□□ 0.35
DDX54-205ENST00000548786 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 ANKRD63C9JTQ0 380 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 GCNT3O95395 438 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 RPL17P18621 184 aaKnown RBP17.23■□□□□ 0.35
DDX54-205ENST00000548786 CASP1P29466 404 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 CASP5P51878 434 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 GTF2BQ00403 316 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 KCNA1Q09470 495 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 KCNC3Q14003 757 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 ATL3Q6DD88 541 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 CEP57Q86XR8 500 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 C12orf76Q8N812 135 aaPredicted RBP17.23■□□□□ 0.35
DDX54-205ENST00000548786 SMRP1Q8NCR6 262 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 LEO1Q8WVC0 666 aaPredicted RBP17.23■□□□□ 0.35
DDX54-205ENST00000548786 RIN2Q8WYP3 895 aaPredicted RBP17.23■□□□□ 0.35
DDX54-205ENST00000548786 HPS3Q969F9 1004 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 SPATA32Q96LK8 384 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 KLHL5Q96PQ7 755 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 EMILIN2Q9BXX0 1053 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 CD320Q9NPF0 282 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 FAM13BQ9NYF5 915 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 RCOR1Q9UKL0 485 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 FAM50BQ9Y247 325 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 NCOR1O75376 2440 aa17.23■□□□□ 0.35
DDX54-205ENST00000548786 SF3B1O75533 1304 aaKnown RBP eCLIP17.22■□□□□ 0.356e-11■■■■■ 199.8
DDX54-205ENST00000548786 CITO14578 2027 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 FSD2A1L4K1 749 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 I3L4J1 428 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 B3GAT3O94766 335 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 WEE2P0C1S8 567 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 GAP43P17677 238 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 ASIC1P78348 528 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 KRT85P78386 507 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 COASYQ13057 564 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 SLC10A6Q3KNW5 377 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 RTP2Q5QGT7 225 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 RARS2Q5T160 578 aaKnown RBP17.22■□□□□ 0.35
DDX54-205ENST00000548786 FAM171A1Q5VUB5 890 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 SYCE2Q6PIF2 218 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 PRSS55Q6UWB4 352 aaPredicted RBP17.22■□□□□ 0.35
DDX54-205ENST00000548786 ALKAL1Q6UXT8 129 aa17.22■□□□□ 0.35
DDX54-205ENST00000548786 ZNF720Q7Z2F6 126 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms