RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 CLK3P49761 638 aaKnown RBP5.66□□□□□ -1.5
CCDC38-206ENST00000548771 CHN2P52757 468 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 FAPQ12884 760 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 FOXI1Q12951 378 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 STAT4Q14765 748 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 TAF7LQ5H9L4 462 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 GJC2Q5T442 439 aaPredicted RBP5.66□□□□□ -1.5
CCDC38-206ENST00000548771 ATXN7L2Q5T6C5 722 aaPredicted RBP5.66□□□□□ -1.5
CCDC38-206ENST00000548771 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 RHOT2Q8IXI1 618 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 TGFBRAP1Q8WUH2 860 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 PRDM13Q9H4Q3 707 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 CYP4F11Q9HBI6 524 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 RBM12Q9NTZ6 932 aaKnown RBP5.66□□□□□ -1.5
CCDC38-206ENST00000548771 KLHL11Q9NVR0 708 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 SIK3Q9Y2K2 1263 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 USP15Q9Y4E8 981 aaPredicted RBP5.66□□□□□ -1.5
CCDC38-206ENST00000548771 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
CCDC38-206ENST00000548771 SPDEFO95238 335 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 SPATA31D3P0C874 917 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 MTHFD2P13995 350 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 POU3F3P20264 500 aaPredicted RBP5.65□□□□□ -1.5
CCDC38-206ENST00000548771 PTPN7P35236 360 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 MCAMP43121 646 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 MTNR1BP49286 362 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 GUCY1B3Q02153 619 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 TP53BP2Q13625 1128 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 B3GNTL1Q67FW5 361 aaPredicted RBP5.65□□□□□ -1.5
CCDC38-206ENST00000548771 OTUD7BQ6GQQ9 843 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 SDE2Q6IQ49 451 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 SPATA31D4Q6ZUB0 917 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 KRT26Q7Z3Y9 468 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 CHAC2Q8WUX2 184 aa5.65□□□□□ -1.5
CCDC38-206ENST00000548771 QRSL1Q9H0R6 528 aaKnown RBP5.65□□□□□ -1.5
CCDC38-206ENST00000548771 K7ESF4 209 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 DDX6P26196 483 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC38-206ENST00000548771 SLC6A9P48067 706 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 SEC24CP53992 1094 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 SCAND1P57086 179 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 ERVK-21P61565 698 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 CCT2P78371 535 aaKnown RBP5.64□□□□□ -1.51
CCDC38-206ENST00000548771 RESTQ13127 1097 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 SEPT2Q15019 361 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 MUM1L1Q5H9M0 696 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 TOR2AQ5JU69 321 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 ABHD17BQ5VST6 288 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 AFMIDQ63HM1 303 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 TMEM132CQ8N3T6 1108 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 ASB10Q8WXI3 467 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 TMEM74BQ9NUR3 256 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 MAP3K2Q9Y2U5 619 aa5.64□□□□□ -1.51
CCDC38-206ENST00000548771 UNC119BA6NIH7 251 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 ZAR1LA6NP61 321 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 GPR39O43194 453 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 PRKD3O94806 890 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 HLA-DOAP06340 250 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 ECHS1P30084 290 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 MPLP40238 635 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 USP14P54578 494 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 SRSF2Q01130 221 aaKnown RBP5.63□□□□□ -1.51
CCDC38-206ENST00000548771 MALLQ13021 153 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 RRP12Q5JTH9 1297 aaKnown RBP5.63□□□□□ -1.51
CCDC38-206ENST00000548771 LRCH2Q5VUJ6 765 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 PQLC1Q8N2U9 271 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 OR56A1Q8NGH5 318 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 CASKIN2Q8WXE0 1202 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 BBC3Q96PG8 261 aaPredicted RBP5.63□□□□□ -1.51
CCDC38-206ENST00000548771 MRI1Q9BV20 369 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 ACE2Q9BYF1 805 aaPredicted RBP5.63□□□□□ -1.51
CCDC38-206ENST00000548771 DMRT3Q9NQL9 472 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 C14orf119Q9NWQ9 140 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 SLC23A1Q9UHI7 598 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 ATP11BQ9Y2G3 1177 aa5.63□□□□□ -1.51
CCDC38-206ENST00000548771 CCDC78A2IDD5 438 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 NUDT3O95989 172 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 HKR1P10072 659 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 IL2RBP14784 551 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 GCSHP23434 173 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 ATXN1P54253 815 aaKnown RBP5.62□□□□□ -1.51
CCDC38-206ENST00000548771 BLOC1S1P78537 153 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 MGAT2Q10469 447 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 CCDC142Q17RM4 750 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 PRR16Q569H4 304 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 SEM1Q6ZVN7 128 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 MED25Q71SY5 747 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 DRC7Q8IY82 874 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 CMTR2Q8IYT2 770 aaKnown RBP5.62□□□□□ -1.51
CCDC38-206ENST00000548771 LCORLQ8N3X6 602 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 SUPT20HQ8NEM7 779 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 FBXO18Q8NFZ0 1043 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.62□□□□□ -1.51
CCDC38-206ENST00000548771 SLKQ9H2G2 1235 aaPredicted RBP5.62□□□□□ -1.51
CCDC38-206ENST00000548771 ZNHIT2Q9UHR6 403 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 MAST3O60307 1309 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 PHLDB1Q86UU1 1377 aa5.62□□□□□ -1.51
CCDC38-206ENST00000548771 PRSS23O95084 383 aa5.61□□□□□ -1.51
CCDC38-206ENST00000548771 FPR1P21462 350 aa5.61□□□□□ -1.51
CCDC38-206ENST00000548771 AVPR1BP47901 424 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms