RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 STAMQ92783 540 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 PPP1R10Q96QC0 940 aaKnown RBP19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 TTPALQ9BTX7 342 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 NT5C3AQ9H0P0 336 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 ARHGAP28Q9P2N2 729 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 EPS15L1Q9UBC2 864 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 FBXW11Q9UKB1 542 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 TNFSF13BQ9Y275 285 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 TMEM189-UBE2V1I3L0A0 370 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 HIP1RO75146 1068 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 ZMYND10O75800 440 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 CD2BP2O95400 341 aaKnown RBP19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 GBP2P32456 591 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 NUBP1P53384 320 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 PEX3P56589 373 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 ATP2C1P98194 919 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 PSMD5Q16401 504 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 CWF19L1Q69YN2 538 aaKnown RBP19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 TAS1R3Q7RTX0 852 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 CEP120Q8N960 986 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 LNX1Q8TBB1 728 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 MYADMQ96S97 322 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 CLSTN3Q9BQT9 956 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 PRKD2Q9BZL6 878 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 CDT1Q9H211 546 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 IGSF9Q9P2J2 1179 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 DNM3Q9UQ16 869 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 KIF3AQ9Y496 699 aa19.13■□□□□ 0.65
CHMP1A-205ENST00000548650 MYH15Q9Y2K3 1946 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 K7ERI5 159 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 ST18O60284 1047 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 IGFBP6P24592 240 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 ELAVL2Q12926 359 aaKnown RBP19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 DMP1Q13316 513 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 ZNF568Q3ZCX4 644 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 RILPL1Q5EBL4 403 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 RINT1Q6NUQ1 792 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 DTHD1Q6ZMT9 781 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 PTPRHQ9HD43 1115 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 FAM86C1Q9NVL1 165 aa19.12■□□□□ 0.65
CHMP1A-205ENST00000548650 CCDC169A6NNP5 214 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 ABLIM1O14639 778 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 ADAM12O43184 909 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 GALR2O43603 387 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 GRM5P41594 1212 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 ASTLQ6HA08 431 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 CD300LGQ6UXG3 332 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 C1orf186Q6ZWK4 172 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 GET4Q7L5D6 327 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 APBB1IPQ7Z5R6 666 aaPredicted RBP19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 CEP57Q86XR8 500 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 TMX3Q96JJ7 454 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 DRC1Q96MC2 740 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 ACO2Q99798 780 aaKnown RBP19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 TMEM134Q9H6X4 195 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 PIDD1Q9HB75 910 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 GOLGA2P5Q9HBQ8 144 aa19.11■□□□□ 0.65
CHMP1A-205ENST00000548650 NOTCH4Q99466 2003 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 NARSO43776 548 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 FGFR3P22607 806 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 PROZP22891 400 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 GUCY2CP25092 1073 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 CLCNKBP51801 687 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 SOX4Q06945 474 aaPredicted RBP19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 XKR4Q5GH76 650 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 HYIQ5T013 277 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 MCTP1Q6DN14 999 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 C3orf58Q8NDZ4 430 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 RSAD2Q8WXG1 361 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 PNMA5Q96PV4 448 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 TARS2Q9BW92 718 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 MRPL4Q9BYD3 311 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 MFSD1Q9H3U5 465 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 MTRRQ9UBK8 725 aa19.1■□□□□ 0.65
CHMP1A-205ENST00000548650 USP34Q70CQ2 3546 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 SMIM28A0A1B0GU29 152 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 B3GAT3O94766 335 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 C8AP07357 584 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 NPR3P17342 541 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 GJB2P29033 226 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 UPP1Q16831 310 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 LIN9Q5TKA1 542 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 PDXDC1Q6P996 788 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 SNX27Q96L92 541 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 UROC1Q96N76 676 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 CCDC94Q9BW85 323 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 C17orf75Q9HAS0 396 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 KMT5AQ9NQR1 393 aa19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 TOPORSQ9NS56 1045 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-205ENST00000548650 H0Y858 1186 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 SLC16A4O15374 487 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 MEFVO15553 781 aaPredicted RBP19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 HNRNPA1P09651 372 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 MCF2P10911 925 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 LAMP2P13473 410 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 HOXA9P31269 272 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 CLCN5P51795 746 aa19.08■□□□□ 0.64
CHMP1A-205ENST00000548650 YARSP54577 528 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms