RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 LARGE1O95461 756 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 SPATA31C1P0DKV0 1188 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 MCM7P33993 719 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 OR1D2P34982 312 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 GUCY1B3Q02153 619 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 CREMQ03060 361 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 PRPF4BQ13523 1007 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 SLC44A4Q53GD3 710 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 GLRA4Q5JXX5 417 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 PHLDB3Q6NSJ2 640 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 ERMP1Q7Z2K6 904 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 CATSPER3Q86XQ3 398 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 ZBTB8OSQ8IWT0 167 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 PJA1Q8NG27 643 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 SLC7A14Q8TBB6 771 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 FGF13Q92913 245 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 NFKBIZQ9BYH8 718 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 PDZD7Q9H5P4 517 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 SLC2A4RGQ9NR83 387 aa13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 PRMT7Q9NVM4 692 aaPredicted RBP13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 SPATA6Q9NWH7 488 aaPredicted RBP13.21□□□□□ -0.29
TRAFD1-205ENST00000548277 FAM170BA6NMN3 283 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 I3L4J1 428 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 RECQL4O94761 1208 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 EDN1P05305 212 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 PRKCBP05771 671 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 ME3Q16798 604 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 AXDND1Q5T1B0 1012 aaPredicted RBP13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 DIS3L2Q8IYB7 885 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 MCRS1Q96EZ8 462 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 SHDQ96IW2 340 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 FZD8Q9H461 694 aa13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 DNMT3BQ9UBC3 853 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-205ENST00000548277 DCHS1Q96JQ0 3298 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 KANSL1LA0AUZ9 987 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 MED19A0JLT2 244 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 N4BP3O15049 544 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 JAK2O60674 1132 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 B3GAT3O94766 335 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 HNRNPA1P09651 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 XRCC6P12956 609 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 BRCC3P46736 316 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 ARPP19P56211 112 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 STARD6P59095 220 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 CSTF1Q05048 431 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 TRIM29Q14134 588 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 ZNF174Q15697 407 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 MLF2Q15773 248 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 MAPK6Q16659 721 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 ZC3H14Q6PJT7 736 aaKnown RBP13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 DGLUCYQ7Z3D6 616 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 ADPGKQ9BRR6 497 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 GOLGA2P5Q9HBQ8 144 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
TRAFD1-205ENST00000548277 TICRRQ7Z2Z1 1910 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 ARHGEF35A5YM69 484 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 LAMTOR5O43504 91 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 XYLBO75191 536 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 PAPLNO95428 1278 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 C1RP00736 705 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 TKTP29401 623 aaKnown RBP13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 CLCNKBP51801 687 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 OSTNP61366 133 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 NAB2Q15742 525 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 PABPC1LQ4VXU2 614 aaKnown RBP13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 TSSK4Q6SA08 328 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 GPR65Q8IYL9 337 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 MAML2Q8IZL2 1156 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 MCPH1Q8NEM0 835 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 PRIMPOLQ96LW4 560 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 NACC1Q96RE7 527 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 BCO2Q9BYV7 579 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 PLA2G2FQ9BZM2 168 aa13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 ZFP37Q9Y6Q3 630 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 PDCD11Q14690 1871 aaKnown RBP13.18□□□□□ -0.3
TRAFD1-205ENST00000548277 ACKR2O00590 384 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 RAB33AQ14088 237 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 FAM187BQ17R55 369 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 CDCA2Q69YH5 1023 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 MTSS1LQ765P7 747 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 NSUN7Q8NE18 718 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 RUBCNQ92622 972 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 TUFT1Q9NNX1 390 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 MRPS23Q9Y3D9 190 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 ATG2BQ96BY7 2078 aa13.17□□□□□ -0.3
TRAFD1-205ENST00000548277 ANK1P16157 1881 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms