RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 SRRM3A6NNA2 597 aaPredicted RBP10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 ZBTB39O15060 712 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 GYG2O15488 501 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 RIPK2O43353 540 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 MT-ND3P03897 115 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 PYGMP11217 842 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 CD58P19256 250 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 CAV1Q03135 178 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 GPS1Q13098 491 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 DACT2Q5SW24 774 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 ARHGEF16Q5VV41 709 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 SEPT14Q6ZU15 432 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 RFX8Q6ZV50 586 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 CPA5Q8WXQ8 436 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 GRAMD1AQ96CP6 724 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 PGM2Q96G03 612 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 TRAIPQ9BWF2 469 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 TRABDQ9H4I3 376 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 KLHL11Q9NVR0 708 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 PRR12Q9ULL5 1215 aa10.1□□□□□ -0.79
CALCOCO1-210ENST00000548263 GOLGA8RI6L899 631 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 SKIP12755 728 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 RFX1P22670 979 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CEP55Q53EZ4 464 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 KRT39Q6A163 491 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 RSBN1LQ6PCB5 846 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 ZBED8Q8IZ13 594 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 SLC17A8Q8NDX2 589 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 LNX1Q8TBB1 728 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 FBXO41Q8TF61 875 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 TRIM11Q96F44 468 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 ANKFY1Q9P2R3 1169 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 FAM198AQ9UFP1 575 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 SCOCQ9UIL1 159 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 ZNRF3Q9ULT6 936 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 ZC3H4Q9UPT8 1303 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 BAZ2AQ9UIF9 1905 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 FAM47DPA6NHR8 397 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 KIAA0391O15091 583 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 PPFIA2O75334 1257 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 INHBAP08476 426 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 ALDH5A1P51649 535 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 HMGCS2P54868 508 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 KCNJ2P63252 427 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 MTMR2Q13614 643 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 TNFAIP1Q13829 316 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 STAT4Q14765 748 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 LMBRD2Q68DH5 695 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 BTNL9Q6UXG8 535 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CENPUQ71F23 418 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 ZC3H18Q86VM9 953 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 TTC17Q96AE7 1141 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 MIEF2Q96C03 454 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CEP170P1Q96L14 293 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 SERPINB12Q96P63 405 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 HSPBP1Q9NZL4 362 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CNOT7Q9UIV1 285 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 DNAJC8O75937 253 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 TARSP26639 723 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 MARCKSL1P49006 195 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 BASP1P80723 227 aaKnown RBP10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CBWD6Q4V339 395 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CBWD3Q5JTY5 395 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CBWD5Q5RIA9 395 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 LONP2Q86WA8 852 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 CCDC110Q8TBZ0 833 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 AGAP11Q8TF27 550 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 TRIM4Q9C037 500 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 TMEM117Q9H0C3 514 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 TUFT1Q9NNX1 390 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 GINM1Q9NU53 330 aa10.09□□□□□ -0.79
CALCOCO1-210ENST00000548263 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 M0R2N6 131 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ZBED4O75132 1171 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 CDR2Q01850 454 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 DUPD1Q68J44 220 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ANKMY2Q8IV38 441 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ALG3Q92685 438 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 HES6Q96HZ4 224 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 PPP1R16BQ96T49 567 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ERVK-5Q9HDB9 667 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 UVRAGQ9P2Y5 699 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 HAO1Q9UJM8 370 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 USH1CQ9Y6N9 552 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 GTPBP10A4D1E9 387 aaKnown RBP10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 LRRIQ4A6NIV6 560 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 EIF3DO15371 548 aaKnown RBP eCLIP10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ASNSP08243 561 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 KRT19P08727 400 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 RARAP10276 462 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 FNTAP49354 379 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 RNASELQ05823 741 aaKnown RBP10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 PDIA2Q13087 525 aaKnown RBP10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 P3H1Q32P28 736 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ZCWPW2Q504Y3 356 aa10.08□□□□□ -0.8
CALCOCO1-210ENST00000548263 ARSHQ5FYA8 562 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms